RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 FOXR1Q6PIV2 292 aa18.33■□□□□ 0.53
PRPF40B-201ENST00000261897 N4BP1O75113 896 aaKnown RBP18.33■□□□□ 0.52
PRPF40B-201ENST00000261897 TTC19Q6DKK2 380 aaPredicted RBP18.33■□□□□ 0.52
PRPF40B-201ENST00000261897 CC2D1AQ6P1N0 951 aaPredicted RBP18.33■□□□□ 0.52
PRPF40B-201ENST00000261897 MAP4K1Q92918 833 aa18.33■□□□□ 0.52
PRPF40B-201ENST00000261897 TM6SF1Q9BZW5 370 aa18.33■□□□□ 0.52
PRPF40B-201ENST00000261897 BICC1Q9H694 974 aaKnown RBP18.33■□□□□ 0.52
PRPF40B-201ENST00000261897 DHX16O60231 1041 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 CHMP4BP1P59074 171 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 PPP2R2CQ9Y2T4 447 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 RBM33Q96EV2 1170 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 FAM107BQ9H098 131 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 KIF5CO60282 957 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 ZMYND10O75800 440 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 H2AFXP16104 143 aaPredicted RBP18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 LIG3P49916 1009 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 LGR6Q9HBX8 967 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 SALL3Q9BXA9 1300 aa18.32■□□□□ 0.52
PRPF40B-201ENST00000261897 MYOM2P54296 1465 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 A0A1B0GUL7 405 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 RGS22Q8NE09 1264 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 SPHKAPQ2M3C7 1700 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 CDC25BP30305 580 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 TRIM29Q14134 588 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
PRPF40B-201ENST00000261897 QRICH2Q9H0J4 1663 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 EFCAB8A8MWE9 144 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 JRKLQ9Y4A0 524 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 MATR3P43243 847 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 DNA2P51530 1060 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 CLIC6Q96NY7 704 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 TTC21BQ7Z4L5 1316 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 ARHGAP31Q2M1Z3 1444 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-201ENST00000261897 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 HOOK1Q9UJC3 728 aaKnown RBP18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 CYP21A2P08686 494 aa18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 ACTN2P35609 894 aa18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 TADA3O75528 432 aa18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 MTF1Q14872 753 aa18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
PRPF40B-201ENST00000261897 KIAA0232Q92628 1395 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 TBC1D8O95759 1140 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 MYL5Q02045 173 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 TOGARAM2Q6ZUX3 1019 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 MYD88Q99836 296 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 POLD4Q9HCU8 107 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 SARM1Q6SZW1 724 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 GOLGA5Q8TBA6 731 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 PCMTD1Q96MG8 357 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 PRAMEF22A3QJZ6 481 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 SUCLG2Q96I99 432 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 ACBD3Q9H3P7 528 aa18.28■□□□□ 0.52
PRPF40B-201ENST00000261897 AOX1Q06278 1338 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 PSDA5PKW4 1024 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 AFMP43652 599 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 PROSER3Q2NL68 480 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 GPR161Q8N6U8 529 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 RASSF8Q8NHQ8 419 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 NOC3LQ8WTT2 800 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 IMPACTQ9P2X3 320 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 H3BQF6 201 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 PFKFB1P16118 471 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-201ENST00000261897 A0A0G2JLW4 131 aa18.27■□□□□ 0.51
PRPF40B-201ENST00000261897 AIFM3Q96NN9 605 aa18.27■□□□□ 0.51
PRPF40B-201ENST00000261897 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.51
PRPF40B-201ENST00000261897 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.51
PRPF40B-201ENST00000261897 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 DDX58O95786 925 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 MRPS25P82663 173 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 TFCP2Q12800 502 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 TRDNQ13061 729 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 CTR9Q6PD62 1173 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 SRLQ86TD4 932 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 NSUN7Q8NE18 718 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 HMG20BQ9P0W2 317 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 A0A0G2JS52 829 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 TAF5LO75529 589 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 IVLP07476 585 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 SETQ01105 290 aaPredicted RBP18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 ICE2Q659A1 982 aa18.26■□□□□ 0.51
PRPF40B-201ENST00000261897 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms