RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 CAVIN2O95810 425 aa22.68■■□□□ 1.22
SCARB1-201ENST00000261693 ZSCAN20P17040 1043 aaPredicted RBP22.68■■□□□ 1.22
SCARB1-201ENST00000261693 EXOSC10Q01780 885 aaKnown RBP22.68■■□□□ 1.22
SCARB1-201ENST00000261693 USP27XA6NNY8 438 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 HSPD1P10809 573 aaKnown RBP22.67■■□□□ 1.22
SCARB1-201ENST00000261693 TTLL5Q6EMB2 1281 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 ATG9AQ7Z3C6 839 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 FILIP1Q7Z7B0 1213 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 MEGF6O75095 1541 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 SMTNL1A8MU46 457 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 FOXO4P98177 505 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
SCARB1-201ENST00000261693 FSIP1Q8NA03 581 aa22.67■■□□□ 1.22
SCARB1-201ENST00000261693 ZNF594Q96JF6 807 aaPredicted RBP22.67■■□□□ 1.22
SCARB1-201ENST00000261693 ARFGEF2Q9Y6D5 1785 aa22.66■■□□□ 1.22
SCARB1-201ENST00000261693 CYP27B1O15528 508 aa22.66■■□□□ 1.22
SCARB1-201ENST00000261693 CDC25BP30305 580 aa22.66■■□□□ 1.22
SCARB1-201ENST00000261693 DDX17Q92841 729 aaKnown RBP22.66■■□□□ 1.22
SCARB1-201ENST00000261693 GPHNQ9NQX3 736 aaPredicted RBP22.66■■□□□ 1.22
SCARB1-201ENST00000261693 CTAGE5O15320 804 aa22.66■■□□□ 1.22
SCARB1-201ENST00000261693 PDIA3P30101 505 aaKnown RBP22.66■■□□□ 1.22
SCARB1-201ENST00000261693 DHX40Q8IX18 779 aaKnown RBP22.66■■□□□ 1.22
SCARB1-201ENST00000261693 HELLSQ9NRZ9 838 aa22.66■■□□□ 1.22
SCARB1-201ENST00000261693 ZHX1Q9UKY1 873 aaPredicted RBP22.66■■□□□ 1.22
SCARB1-201ENST00000261693 PLBD2Q8NHP8 589 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 ZNF396Q96N95 335 aaPredicted RBP22.65■■□□□ 1.22
SCARB1-201ENST00000261693 DSCC1Q9BVC3 393 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 FAM160A1Q05DH4 1040 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 LRRC24Q50LG9 513 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 OTUD7BQ6GQQ9 843 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 SARM1Q6SZW1 724 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 ENGASEQ8NFI3 743 aa22.65■■□□□ 1.22
SCARB1-201ENST00000261693 ZMYM1Q5SVZ6 1142 aa22.64■■□□□ 1.22
SCARB1-201ENST00000261693 CCDC112Q8NEF3 446 aa22.64■■□□□ 1.22
SCARB1-201ENST00000261693 PALLDQ8WX93 1383 aa22.64■■□□□ 1.22
SCARB1-201ENST00000261693 MAST3O60307 1309 aa22.64■■□□□ 1.21
SCARB1-201ENST00000261693 CABLES1Q8TDN4 633 aa22.64■■□□□ 1.21
SCARB1-201ENST00000261693 MRFAP1L1Q96HT8 127 aa22.64■■□□□ 1.21
SCARB1-201ENST00000261693 SKILP12757 684 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 CABP4P57796 275 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 CHRNA2Q15822 529 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 CEP135Q66GS9 1140 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 AOPEPQ8N6M6 819 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 DCAF5Q96JK2 942 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 SALL1Q9NSC2 1324 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 A0A1B0GVL5 298 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 AGXT2Q9BYV1 514 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 PCDHA7Q9UN72 937 aa22.63■■□□□ 1.21
SCARB1-201ENST00000261693 TRPM3Q9HCF6 1732 aaPredicted RBP22.63■■□□□ 1.21
SCARB1-201ENST00000261693 M0R2C6 588 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 IFIT1P09914 478 aaKnown RBP22.62■■□□□ 1.21
SCARB1-201ENST00000261693 DMTNQ08495 405 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 TTLL7Q6ZT98 887 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 ANO10Q9NW15 660 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 TRMT1Q9NXH9 659 aaKnown RBP22.62■■□□□ 1.21
SCARB1-201ENST00000261693 CARMIL3Q8ND23 1372 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 FDPSP14324 419 aaKnown RBP22.62■■□□□ 1.21
SCARB1-201ENST00000261693 HAND2P61296 217 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 RAB11FIP4Q86YS3 637 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 PAXBP1Q9Y5B6 917 aa22.62■■□□□ 1.21
SCARB1-201ENST00000261693 CCDC69A6NI79 296 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 NBPF14Q5TI25 921 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
SCARB1-201ENST00000261693 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 SDF4Q9BRK5 362 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 LMTK3Q96Q04 1460 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 H7C1W4 665 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 RNF113AO15541 343 aaKnown RBP22.61■■□□□ 1.21
SCARB1-201ENST00000261693 POLR3DP05423 398 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-201ENST00000261693 FKBP4Q02790 459 aaKnown RBP eCLIP22.61■■□□□ 1.21
SCARB1-201ENST00000261693 CEP57L1Q8IYX8 460 aa22.61■■□□□ 1.21
SCARB1-201ENST00000261693 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
SCARB1-201ENST00000261693 A0A1B0GUL7 405 aa22.6■■□□□ 1.21
SCARB1-201ENST00000261693 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
SCARB1-201ENST00000261693 ZNF274Q96GC6 653 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-201ENST00000261693 ZBTB3Q9H5J0 574 aa22.6■■□□□ 1.21
SCARB1-201ENST00000261693 IL15P40933 162 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-201ENST00000261693 NDUFA8P51970 172 aa22.59■■□□□ 1.21
SCARB1-201ENST00000261693 PROSER2Q86WR7 435 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-201ENST00000261693 FMR1NBQ8N0W7 255 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-201ENST00000261693 MRPS27Q92552 414 aaKnown RBP22.59■■□□□ 1.21
SCARB1-201ENST00000261693 GJB4Q9NTQ9 266 aa22.59■■□□□ 1.21
SCARB1-201ENST00000261693 CWC25Q9NXE8 425 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-201ENST00000261693 CLIC4Q9Y696 253 aa22.59■■□□□ 1.21
SCARB1-201ENST00000261693 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
SCARB1-201ENST00000261693 RBM6P78332 1123 aaKnown RBP22.58■■□□□ 1.21
SCARB1-201ENST00000261693 CCZ1BP86790 482 aa22.58■■□□□ 1.21
SCARB1-201ENST00000261693 CCZ1P86791 482 aaPredicted RBP22.58■■□□□ 1.21
SCARB1-201ENST00000261693 PTPN14Q15678 1187 aa22.58■■□□□ 1.21
SCARB1-201ENST00000261693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.58■■□□□ 1.21
SCARB1-201ENST00000261693 TAOK2Q9UL54 1235 aa22.58■■□□□ 1.21
SCARB1-201ENST00000261693 SF3A1Q15459 793 aaKnown RBP22.58■■□□□ 1.2
SCARB1-201ENST00000261693 ATL3Q6DD88 541 aa22.58■■□□□ 1.2
SCARB1-201ENST00000261693 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.58■■□□□ 1.23e-7■□□□□ 9.2
SCARB1-201ENST00000261693 V9GYY5 206 aaPredicted RBP22.58■■□□□ 1.2
SCARB1-201ENST00000261693 EYA2O00167 538 aa22.57■■□□□ 1.2
SCARB1-201ENST00000261693 WASHC4Q2M389 1173 aa22.57■■□□□ 1.2
SCARB1-201ENST00000261693 IGSF3O75054 1194 aa22.57■■□□□ 1.2
SCARB1-201ENST00000261693 A1BGP04217 495 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms