RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 LRRC2Q9BYS8 371 aa27.3■■□□□ 1.96
PREB-201ENST00000260643 ZNF215Q9UL58 517 aaPredicted RBP27.3■■□□□ 1.96
PREB-201ENST00000260643 C5P01031 1676 aa27.3■■□□□ 1.96
PREB-201ENST00000260643 A0A1W2PQ27 194 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 A0A1W2PQ64 194 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 A0A1W2PQD8 194 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 COPS6Q7L5N1 327 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 ILDR1Q86SU0 546 aaPredicted RBP27.29■■□□□ 1.96
PREB-201ENST00000260643 FBXL16Q8N461 479 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 DNAJC2Q99543 621 aaKnown RBP27.29■■□□□ 1.96
PREB-201ENST00000260643 CHGBP05060 677 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 FSIP1Q8NA03 581 aa27.29■■□□□ 1.96
PREB-201ENST00000260643 LAMA4Q16363 1823 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 KCNJ6P48051 423 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 RTEL1Q9NZ71 1219 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 APOBRQ0VD83 1088 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 ADALQ6DHV7 355 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 FILIP1Q7Z7B0 1213 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 NBPF11Q86T75 865 aa27.28■■□□□ 1.96
PREB-201ENST00000260643 DHX8Q14562 1220 aaKnown RBP27.27■■□□□ 1.96
PREB-201ENST00000260643 KMT5BQ4FZB7 885 aa27.27■■□□□ 1.96
PREB-201ENST00000260643 ANKRD13DQ6ZTN6 518 aa27.27■■□□□ 1.96
PREB-201ENST00000260643 MRPS27Q92552 414 aaKnown RBP27.27■■□□□ 1.96
PREB-201ENST00000260643 NDUFB9Q9Y6M9 179 aa27.27■■□□□ 1.96
PREB-201ENST00000260643 DDX46Q7L014 1031 aaKnown RBP27.26■■□□□ 1.96
PREB-201ENST00000260643 AOPEPQ8N6M6 819 aa27.26■■□□□ 1.96
PREB-201ENST00000260643 ME1P48163 572 aa27.26■■□□□ 1.95
PREB-201ENST00000260643 EVCP57679 992 aa27.26■■□□□ 1.95
PREB-201ENST00000260643 SLC52A2Q9HAB3 445 aa27.26■■□□□ 1.95
PREB-201ENST00000260643 MYL6BP14649 208 aa27.25■■□□□ 1.95
PREB-201ENST00000260643 PDIA3P30101 505 aaKnown RBP27.25■■□□□ 1.95
PREB-201ENST00000260643 PCDHA7Q9UN72 937 aa27.25■■□□□ 1.95
PREB-201ENST00000260643 TMEM94Q12767 1356 aa27.25■■□□□ 1.95
PREB-201ENST00000260643 SLU7O95391 586 aaKnown RBP27.25■■□□□ 1.95
PREB-201ENST00000260643 KRT222Q8N1A0 295 aa27.25■■□□□ 1.95
PREB-201ENST00000260643 L2HGDHQ9H9P8 463 aa27.25■■□□□ 1.95
PREB-201ENST00000260643 TUBB4AP04350 444 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 SLFN14P0C7P3 912 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 ZMYM1Q5SVZ6 1142 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 CARMIL3Q8ND23 1372 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 TAF3Q5VWG9 929 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 CCDC150Q8NCX0 1101 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 GPR108Q9NPR9 543 aa27.24■■□□□ 1.95
PREB-201ENST00000260643 ERBB3P21860 1342 aa27.23■■□□□ 1.95
PREB-201ENST00000260643 PSDA5PKW4 1024 aaPredicted RBP27.23■■□□□ 1.95
PREB-201ENST00000260643 E7EWF7 191 aa27.23■■□□□ 1.95
PREB-201ENST00000260643 CASP7P55210 303 aa27.23■■□□□ 1.95
PREB-201ENST00000260643 ESCO1Q5FWF5 840 aa27.23■■□□□ 1.95
PREB-201ENST00000260643 KIAA1468Q9P260 1216 aa27.23■■□□□ 1.95
PREB-201ENST00000260643 KDM6AO15550 1401 aaPredicted RBP27.22■■□□□ 1.95
PREB-201ENST00000260643 CCT2P78371 535 aaKnown RBP27.22■■□□□ 1.95
PREB-201ENST00000260643 SLC39A6Q13433 755 aa27.22■■□□□ 1.95
PREB-201ENST00000260643 TRMT1Q9NXH9 659 aaKnown RBP27.22■■□□□ 1.95
PREB-201ENST00000260643 FDPSP14324 419 aaKnown RBP27.21■■□□□ 1.95
PREB-201ENST00000260643 UBE3BQ7Z3V4 1068 aa27.21■■□□□ 1.95
PREB-201ENST00000260643 LINC00301Q8NCQ3 95 aa27.21■■□□□ 1.95
PREB-201ENST00000260643 PAG1Q9NWQ8 432 aa27.21■■□□□ 1.95
PREB-201ENST00000260643 NEDD4P46934 1319 aa27.21■■□□□ 1.95
PREB-201ENST00000260643 E4F1Q66K89 784 aaPredicted RBP27.21■■□□□ 1.95
PREB-201ENST00000260643 SDF4Q9BRK5 362 aa27.21■■□□□ 1.95
PREB-201ENST00000260643 NCOA5Q9HCD5 579 aaKnown RBP27.21■■□□□ 1.95
PREB-201ENST00000260643 SCN11AQ9UI33 1791 aa27.21■■□□□ 1.95
PREB-201ENST00000260643 A0A087WWV3 80 aa27.2■■□□□ 1.94
PREB-201ENST00000260643 YEATS4O95619 227 aa27.2■■□□□ 1.94
PREB-201ENST00000260643 HSPD1P10809 573 aaKnown RBP27.2■■□□□ 1.94
PREB-201ENST00000260643 FAM193AP78312 1265 aa27.2■■□□□ 1.94
PREB-201ENST00000260643 FBXO38Q6PIJ6 1188 aa27.2■■□□□ 1.94
PREB-201ENST00000260643 KCNG4Q8TDN1 519 aa27.2■■□□□ 1.94
PREB-201ENST00000260643 FOSBP53539 338 aa27.19■■□□□ 1.94
PREB-201ENST00000260643 POLR3EQ9NVU0 708 aa27.19■■□□□ 1.94
PREB-201ENST00000260643 AXIN2Q9Y2T1 843 aa27.19■■□□□ 1.94
PREB-201ENST00000260643 TERF2Q15554 542 aa27.19■■□□□ 1.94
PREB-201ENST00000260643 ZNF771Q7L3S4 317 aaPredicted RBP27.19■■□□□ 1.94
PREB-201ENST00000260643 NDUFA8P51970 172 aa27.18■■□□□ 1.94
PREB-201ENST00000260643 ELF2Q15723 593 aa27.18■■□□□ 1.94
PREB-201ENST00000260643 CCDC93Q567U6 631 aa27.18■■□□□ 1.94
PREB-201ENST00000260643 RGS22Q8NE09 1264 aa27.18■■□□□ 1.94
PREB-201ENST00000260643 SNRPA1P09661 255 aaKnown RBP27.18■■□□□ 1.94
PREB-201ENST00000260643 ZNF496Q96IT1 587 aaPredicted RBP27.18■■□□□ 1.94
PREB-201ENST00000260643 FER1L4A9Z1Z3 1794 aa27.17■■□□□ 1.94
PREB-201ENST00000260643 GOLIM4O00461 696 aa27.17■■□□□ 1.94
PREB-201ENST00000260643 IGSF3O75054 1194 aa27.17■■□□□ 1.94
PREB-201ENST00000260643 DPCR1Q3MIW9 517 aa27.17■■□□□ 1.94
PREB-201ENST00000260643 ARMCX5Q6P1M9 558 aa27.17■■□□□ 1.94
PREB-201ENST00000260643 PPP1R13BQ96KQ4 1090 aa27.17■■□□□ 1.94
PREB-201ENST00000260643 AFDNP55196 1824 aaKnown RBP27.16■■□□□ 1.94
PREB-201ENST00000260643 A0A087WZG4 1122 aa27.16■■□□□ 1.94
PREB-201ENST00000260643 A0A1B0GVL5 298 aa27.16■■□□□ 1.94
PREB-201ENST00000260643 ATG9AQ7Z3C6 839 aa27.16■■□□□ 1.94
PREB-201ENST00000260643 XPO4Q9C0E2 1151 aaKnown RBP27.16■■□□□ 1.94
PREB-201ENST00000260643 GUCY1B3Q02153 619 aa27.16■■□□□ 1.94
PREB-201ENST00000260643 SPEF2Q9C093 1822 aa27.16■■□□□ 1.94
PREB-201ENST00000260643 MAST3O60307 1309 aa27.16■■□□□ 1.94
PREB-201ENST00000260643 H2AFXP16104 143 aaPredicted RBP27.15■■□□□ 1.94
PREB-201ENST00000260643 NLRP12P59046 1061 aa27.15■■□□□ 1.94
PREB-201ENST00000260643 BRAPQ7Z569 592 aa27.15■■□□□ 1.94
PREB-201ENST00000260643 ERCC4Q92889 916 aaPredicted RBP27.15■■□□□ 1.94
PREB-201ENST00000260643 ARFGEF2Q9Y6D5 1785 aa27.15■■□□□ 1.94
PREB-201ENST00000260643 NFATC2IPQ8NCF5 419 aa27.15■■□□□ 1.94
PREB-201ENST00000260643 RNF113AO15541 343 aaKnown RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms