RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 DBNDD2Q9BQY9 259 aa19.43■□□□□ 0.7
CCDC90B-201ENST00000260054 IFIT2P09913 472 aaKnown RBP19.42■□□□□ 0.7
CCDC90B-201ENST00000260054 SLC5A1P13866 664 aa19.42■□□□□ 0.7
CCDC90B-201ENST00000260054 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
CCDC90B-201ENST00000260054 IRS2Q9Y4H2 1338 aa19.42■□□□□ 0.7
CCDC90B-201ENST00000260054 C6orf229H3BNL8 230 aa19.41■□□□□ 0.7
CCDC90B-201ENST00000260054 IFIT1P09914 478 aaKnown RBP19.41■□□□□ 0.7
CCDC90B-201ENST00000260054 SOGA3Q5TF21 947 aa19.41■□□□□ 0.7
CCDC90B-201ENST00000260054 XAGE2Q96GT9 111 aa19.41■□□□□ 0.7
CCDC90B-201ENST00000260054 RTFDC1Q9BY42 306 aaPredicted RBP19.41■□□□□ 0.7
CCDC90B-201ENST00000260054 ARFGEF1Q9Y6D6 1849 aa19.41■□□□□ 0.7
CCDC90B-201ENST00000260054 TXNRD3Q86VQ6 643 aa19.4■□□□□ 0.7
CCDC90B-201ENST00000260054 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
CCDC90B-201ENST00000260054 ARAP2Q8WZ64 1704 aa19.4■□□□□ 0.7
CCDC90B-201ENST00000260054 GRIPAP1Q4V328 841 aa19.4■□□□□ 0.7
CCDC90B-201ENST00000260054 PLEKHM2Q8IWE5 1019 aa19.39■□□□□ 0.69
CCDC90B-201ENST00000260054 PSMD1Q99460 953 aa19.39■□□□□ 0.69
CCDC90B-201ENST00000260054 YBX3P16989 372 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCDC90B-201ENST00000260054 MX1P20591 662 aa19.38■□□□□ 0.69
CCDC90B-201ENST00000260054 GYG1P46976 350 aa19.38■□□□□ 0.69
CCDC90B-201ENST00000260054 TSHZ3Q63HK5 1081 aa19.38■□□□□ 0.69
CCDC90B-201ENST00000260054 C15orf52Q6ZUT6 534 aaKnown RBP19.38■□□□□ 0.69
CCDC90B-201ENST00000260054 MED23Q9ULK4 1368 aa19.38■□□□□ 0.69
CCDC90B-201ENST00000260054 BCAMP50895 628 aa19.37■□□□□ 0.69
CCDC90B-201ENST00000260054 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCDC90B-201ENST00000260054 FAM84BQ96KN1 310 aaPredicted RBP19.37■□□□□ 0.69
CCDC90B-201ENST00000260054 FER1L6Q2WGJ9 1857 aa19.37■□□□□ 0.69
CCDC90B-201ENST00000260054 NFKBIEO00221 500 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 PHKA1P46020 1223 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 RGS3P49796 1198 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 PDE1AP54750 535 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 GORABQ5T7V8 394 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 CCDC102BQ68D86 513 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 UTRNP46939 3433 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 RIMBP2O15034 1052 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 WASHC4Q2M389 1173 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 CAVIN4Q5BKX8 364 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 EYA3Q99504 573 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 ECHDC1Q9NTX5 307 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 STAP2Q9UGK3 403 aa19.36■□□□□ 0.69
CCDC90B-201ENST00000260054 CCDC158Q5M9N0 1113 aa19.35■□□□□ 0.69
CCDC90B-201ENST00000260054 FBXO33Q7Z6M2 555 aa19.35■□□□□ 0.69
CCDC90B-201ENST00000260054 SUPT20HQ8NEM7 779 aa19.35■□□□□ 0.69
CCDC90B-201ENST00000260054 ZC3H12CQ9C0D7 883 aaKnown RBP19.35■□□□□ 0.69
CCDC90B-201ENST00000260054 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
CCDC90B-201ENST00000260054 TTC41PQ6P2S7 1318 aa19.34■□□□□ 0.69
CCDC90B-201ENST00000260054 HIBADHP31937 336 aaKnown RBP19.34■□□□□ 0.69
CCDC90B-201ENST00000260054 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
CCDC90B-201ENST00000260054 ZNF277Q9NRM2 450 aaPredicted RBP19.34■□□□□ 0.69
CCDC90B-201ENST00000260054 RASSF7Q02833 373 aa19.33■□□□□ 0.69
CCDC90B-201ENST00000260054 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.69
CCDC90B-201ENST00000260054 AOC3Q16853 763 aa19.33■□□□□ 0.69
CCDC90B-201ENST00000260054 TTC39AQ5SRH9 613 aa19.33■□□□□ 0.69
CCDC90B-201ENST00000260054 PI4K2BQ8TCG2 481 aa19.33■□□□□ 0.69
CCDC90B-201ENST00000260054 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.69
CCDC90B-201ENST00000260054 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.68
CCDC90B-201ENST00000260054 ZNF804AQ7Z570 1209 aa19.33■□□□□ 0.68
CCDC90B-201ENST00000260054 VPS37DQ86XT2 251 aa19.33■□□□□ 0.68
CCDC90B-201ENST00000260054 PPIP5K2O43314 1243 aa19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 ATP5JP18859 108 aa19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 ARID4AP29374 1257 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 SCARF1Q14162 830 aa19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 ZNF512BQ96KM6 892 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 IQSEC3Q9UPP2 1182 aaPredicted RBP19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 AOX1Q06278 1338 aa19.32■□□□□ 0.68
CCDC90B-201ENST00000260054 PRELPP51888 382 aa19.31■□□□□ 0.68
CCDC90B-201ENST00000260054 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
CCDC90B-201ENST00000260054 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
CCDC90B-201ENST00000260054 CD209Q9NNX6 404 aa19.31■□□□□ 0.68
CCDC90B-201ENST00000260054 COL4A5P29400 1685 aa19.31■□□□□ 0.68
CCDC90B-201ENST00000260054 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 MCAMP43121 646 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 GPR162Q16538 588 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 PI16Q6UXB8 463 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 COA1Q9GZY4 146 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 BOLA2Q9H3K6 86 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 ERC2O15083 957 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 GLRX3O76003 335 aaKnown RBP19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 UQCRFS1P1P0C7P4 283 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 TDRD7Q8NHU6 1098 aaKnown RBP19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 VPS33BQ9H267 617 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 DBNDD1Q9H9R9 158 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 NDUFB9Q9Y6M9 179 aa19.3■□□□□ 0.68
CCDC90B-201ENST00000260054 COL1A1P02452 1464 aaPredicted RBP19.29■□□□□ 0.68
CCDC90B-201ENST00000260054 IL1R1P14778 569 aa19.29■□□□□ 0.68
CCDC90B-201ENST00000260054 TTC22Q5TAA0 569 aa19.29■□□□□ 0.68
CCDC90B-201ENST00000260054 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
CCDC90B-201ENST00000260054 GSPT1P15170 499 aaKnown RBP19.28■□□□□ 0.68
CCDC90B-201ENST00000260054 SNRKQ9NRH2 765 aa19.28■□□□□ 0.68
CCDC90B-201ENST00000260054 HMG20BQ9P0W2 317 aa19.28■□□□□ 0.68
CCDC90B-201ENST00000260054 AKAP11Q9UKA4 1901 aa19.27■□□□□ 0.68
CCDC90B-201ENST00000260054 G3V3G9 751 aa19.27■□□□□ 0.68
CCDC90B-201ENST00000260054 ZBTB22O15209 634 aa19.27■□□□□ 0.68
CCDC90B-201ENST00000260054 ECE2O60344 883 aa19.27■□□□□ 0.68
CCDC90B-201ENST00000260054 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.68
CCDC90B-201ENST00000260054 SPATA5Q8NB90 893 aa19.27■□□□□ 0.68
CCDC90B-201ENST00000260054 HAUS7Q99871 368 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms