RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 GRIK3Q13003 919 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 ACBD5Q5T8D3 534 aaPredicted RBP12.52□□□□□ -0.41
GCM1-201ENST00000259803 GIMAP6Q6P9H5 292 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 MMS22LQ6ZRQ5 1243 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 MYOCDQ8IZQ8 938 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 TXLNBQ8N3L3 684 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 CDCA7Q9BWT1 371 aaPredicted RBP12.52□□□□□ -0.41
GCM1-201ENST00000259803 KIAA0232Q92628 1395 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 MAGEA9P43362 315 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 TMED1Q13445 227 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 RNF214Q8ND24 703 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 ENOX1Q8TC92 643 aaKnown RBP12.52□□□□□ -0.41
GCM1-201ENST00000259803 SENP7Q9BQF6 1050 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 SWAP70Q9UH65 585 aa12.52□□□□□ -0.41
GCM1-201ENST00000259803 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 F8VZ95 297 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 ZSCAN9O15535 394 aaPredicted RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 SNUPNO95149 360 aaKnown RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 TGFB3P10600 412 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 PRPHP41219 470 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 NASPP49321 788 aaPredicted RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 SYCP1Q15431 976 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 ZNF483Q8TF39 744 aaPredicted RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 BAG4O95429 457 aaKnown RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 STAG1Q8WVM7 1258 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 TRPV5Q9NQA5 729 aa12.51□□□□□ -0.41
GCM1-201ENST00000259803 MAP3K20Q9NYL2 800 aaKnown RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
GCM1-201ENST00000259803 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 GJA8P48165 433 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 PTK7Q13308 1070 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 UHMK1Q8TAS1 419 aaKnown RBP12.5□□□□□ -0.41
GCM1-201ENST00000259803 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 KRT38O76015 456 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 TEX11Q8IYF3 940 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 CCDC102AQ96A19 550 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 NACA2Q9H009 215 aa12.5□□□□□ -0.41
GCM1-201ENST00000259803 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
GCM1-201ENST00000259803 MYSM1Q5VVJ2 828 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
GCM1-201ENST00000259803 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 DNAAF4Q8WXU2 420 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 TSC1Q92574 1164 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 C8orf37Q96NL8 207 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 GABBR1Q9UBS5 961 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 AMPHP49418 695 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 SRLQ86TD4 932 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 DHRS1Q96LJ7 313 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 SLC24A3Q9HC58 644 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 MARF1Q9Y4F3 1742 aaKnown RBP12.49□□□□□ -0.41
GCM1-201ENST00000259803 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
GCM1-201ENST00000259803 DDX11L8A8MPP1 907 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 SASH1O94885 1247 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
GCM1-201ENST00000259803 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 FBXO41Q8TF61 875 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
GCM1-201ENST00000259803 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 LMCD1Q9NZU5 365 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 N6AMT1Q9Y5N5 214 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 IQSEC2Q5JU85 1478 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
GCM1-201ENST00000259803 TRIML1Q8N9V2 468 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 INO80BQ9C086 356 aaPredicted RBP12.48□□□□□ -0.41
GCM1-201ENST00000259803 SPATA7Q9P0W8 599 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 TMEM98Q9Y2Y6 226 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 USP19O94966 1318 aa12.48□□□□□ -0.41
GCM1-201ENST00000259803 MYBBP1AQ9BQG0 1328 aaKnown RBP12.48□□□□□ -0.41
GCM1-201ENST00000259803 TRIM64CA6NLI5 447 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 FOSL1P15407 271 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 FXNQ16595 210 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 DBN1Q16643 649 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 PREPLQ4J6C6 727 aaPredicted RBP12.47□□□□□ -0.41
GCM1-201ENST00000259803 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 TRIM6Q9C030 488 aaPredicted RBP12.47□□□□□ -0.41
GCM1-201ENST00000259803 SOS1Q07889 1333 aaPredicted RBP12.47□□□□□ -0.41
GCM1-201ENST00000259803 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 PDILTQ8N807 584 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 CHMP5Q9NZZ3 219 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms