RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 KLRK1P26718 216 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 PSMA5P28066 241 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 EVX2Q03828 476 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 ERFEQ4G0M1 354 aa10.76□□□□□ -0.69
CKAP2-201ENST00000258607 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 PPP1R1BQ9UD71 204 aaPredicted RBP10.76□□□□□ -0.69
CKAP2-201ENST00000258607 TOPAZ1Q8N9V7 1692 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 MBD4O95243 580 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 FGAP02671 866 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 MARCKSP29966 332 aaPredicted RBP10.75□□□□□ -0.69
CKAP2-201ENST00000258607 CTSWP56202 376 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 TRDNQ13061 729 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 ZBTB9Q96C00 473 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 CWC22Q9HCG8 908 aaKnown RBP10.75□□□□□ -0.69
CKAP2-201ENST00000258607 PIH1D3Q9NQM4 214 aaKnown RBP10.75□□□□□ -0.69
CKAP2-201ENST00000258607 ANKIB1Q9P2G1 1089 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 USP21Q9UK80 565 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 MAP3K15Q6ZN16 1313 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 ZNF532Q9HCE3 1301 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 ATP5JP18859 108 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 IGHMBP2P38935 993 aaKnown RBP10.75□□□□□ -0.69
CKAP2-201ENST00000258607 ME1P48163 572 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 SPATA32Q96LK8 384 aa10.75□□□□□ -0.69
CKAP2-201ENST00000258607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.698e-7■■■■□ 20
CKAP2-201ENST00000258607 ZNF213O14771 459 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 F13A1P00488 732 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 ADD1P35611 737 aaKnown RBP10.74□□□□□ -0.69
CKAP2-201ENST00000258607 CCDC87Q9NVE4 849 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 COL15A1P39059 1388 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 ZPR1O75312 459 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 RPS6KB1P23443 525 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 KLHL40Q2TBA0 621 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 AMIGO3Q86WK7 504 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 ZNF609O15014 1411 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 E7EWF7 191 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
CKAP2-201ENST00000258607 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
CKAP2-201ENST00000258607 LIG1P18858 919 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 ST3GAL1Q11201 340 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 MTX1Q13505 466 aa10.74□□□□□ -0.69
CKAP2-201ENST00000258607 ZBTB38Q8NAP3 1195 aaPredicted RBP10.74□□□□□ -0.69
CKAP2-201ENST00000258607 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 TOM1O60784 492 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 BRD1O95696 1058 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 MSNP26038 577 aaKnown RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 TOB2Q14106 344 aaPredicted RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 CELF1Q92879 486 aaKnown RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 UTP14AQ9BVJ6 771 aaKnown RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 NAPBQ9H115 298 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 SH3TC1Q8TE82 1336 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 COL5A2P05997 1499 aaPredicted RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 PTPDC1A2A3K4 754 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 PRC1O43663 620 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 CYP2E1P05181 493 aaPredicted RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 SCRN1Q12765 414 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 HAUS7Q99871 368 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 DACT1Q9NYF0 836 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 TRIM37O94972 964 aa10.73□□□□□ -0.69
CKAP2-201ENST00000258607 SKOR2Q2VWA4 1001 aaPredicted RBP10.73□□□□□ -0.69
CKAP2-201ENST00000258607 NCOA3Q9Y6Q9 1424 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 CYP7A1P22680 504 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 MCM2P49736 904 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 DYNLL1P63167 89 aaKnown RBP10.72□□□□□ -0.69
CKAP2-201ENST00000258607 RASGRF1Q13972 1273 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 IMMTQ16891 758 aaKnown RBP10.72□□□□□ -0.69
CKAP2-201ENST00000258607 PDILTQ8N807 584 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 TTC12Q9H892 705 aaPredicted RBP10.72□□□□□ -0.69
CKAP2-201ENST00000258607 MTMR6Q9Y217 621 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 DDIT3P35638 169 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 CASP7P55210 303 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 TTC6Q86TZ1 520 aa10.72□□□□□ -0.69
CKAP2-201ENST00000258607 TCHHQ07283 1943 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 HIP1O00291 1037 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 TTC14Q96N46 770 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 CENPFP49454 3210 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 TBC1D9BQ66K14 1250 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.69
CKAP2-201ENST00000258607 RFC4P35249 363 aa10.71□□□□□ -0.7
CKAP2-201ENST00000258607 ANAPC15P60006 121 aa10.71□□□□□ -0.7
CKAP2-201ENST00000258607 ATP2B2Q01814 1243 aa10.71□□□□□ -0.7
CKAP2-201ENST00000258607 CHRNDQ07001 517 aa10.71□□□□□ -0.7
CKAP2-201ENST00000258607 AATFQ9NY61 560 aaKnown RBP eCLIP10.71□□□□□ -0.7
CKAP2-201ENST00000258607 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.7
CKAP2-201ENST00000258607 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 IFIT3O14879 490 aaKnown RBP10.7□□□□□ -0.7
CKAP2-201ENST00000258607 KRT85P78386 507 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 FAM196AQ6ZSG2 479 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 LUZP1Q86V48 1076 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 TSPY26PQ9H489 355 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 ORC3Q9UBD5 711 aaPredicted RBP10.7□□□□□ -0.7
CKAP2-201ENST00000258607 AKAP2Q9Y2D5 859 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 A0A1B0GVL5 298 aa10.7□□□□□ -0.7
CKAP2-201ENST00000258607 PDE8AO60658 829 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms