RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 UBTFL1P0CB47 393 aaPredicted RBP10.7□□□□□ -0.7
TMEM258-201ENST00000257262 VEGFAP15692 232 aaPredicted RBP10.7□□□□□ -0.7
TMEM258-201ENST00000257262 ATP2B4P23634 1241 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 TAF7LQ5H9L4 462 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 ASTLQ6HA08 431 aaPredicted RBP10.7□□□□□ -0.7
TMEM258-201ENST00000257262 LDHAL6AQ6ZMR3 332 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 GPC2Q8N158 579 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 ANKRD2Q9GZV1 360 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 DBNDD1Q9H9R9 158 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 PCDHB13Q9Y5F0 798 aa10.7□□□□□ -0.7
TMEM258-201ENST00000257262 TAF5LO75529 589 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 TOMM70O94826 608 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 CHRNDQ07001 517 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 CXCL9Q07325 125 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
TMEM258-201ENST00000257262 TMEM57Q8N5G2 664 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 HELBQ8NG08 1087 aaPredicted RBP10.69□□□□□ -0.7
TMEM258-201ENST00000257262 MEIS3Q99687 375 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 PUS3Q9BZE2 481 aaKnown RBP10.69□□□□□ -0.7
TMEM258-201ENST00000257262 SCN4AP35499 1836 aa10.69□□□□□ -0.7
TMEM258-201ENST00000257262 ZNF804BA4D1E1 1349 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 YDJCA8MPS7 323 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 G3V3G9 751 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 PLIN1O60240 522 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 ECE2O60344 883 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 RAD17O75943 681 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 GNAI3P08754 354 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 DZIP1LQ8IYY4 767 aaKnown RBP10.68□□□□□ -0.7
TMEM258-201ENST00000257262 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
TMEM258-201ENST00000257262 KCNQ5Q9NR82 932 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 RCAN3Q9UKA8 241 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 HDAC5Q9UQL6 1122 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
TMEM258-201ENST00000257262 LRRFIP2Q9Y608 721 aaKnown RBP10.68□□□□□ -0.7
TMEM258-201ENST00000257262 SNAP23O00161 211 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
TMEM258-201ENST00000257262 RLBP1P12271 317 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 TIE1P35590 1138 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 TNIP1Q15025 636 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 CIAPIN1Q6FI81 312 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 TXNRD3Q86VQ6 643 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 KLHDC4Q8TBB5 520 aa10.67□□□□□ -0.7
TMEM258-201ENST00000257262 MED23Q9ULK4 1368 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 IQCA1LA6NCM1 817 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 KCNJ4P48050 445 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 RFX5P48382 616 aaPredicted RBP10.66□□□□□ -0.7
TMEM258-201ENST00000257262 LRRC24Q50LG9 513 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 LHX8Q68G74 356 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 FTSJ3Q8IY81 847 aaKnown RBP10.66□□□□□ -0.7
TMEM258-201ENST00000257262 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
TMEM258-201ENST00000257262 TAF1DQ9H5J8 278 aaPredicted RBP10.66□□□□□ -0.7
TMEM258-201ENST00000257262 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 RIPOR2Q9Y4F9 1068 aa10.66□□□□□ -0.7
TMEM258-201ENST00000257262 PSMD14O00487 310 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
TMEM258-201ENST00000257262 POTEJP0CG39 1038 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 KLRK1P26718 216 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 EPHX2P34913 555 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 EPS15P42566 896 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 SCNN1DP51172 638 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 PTPN12Q05209 780 aaKnown RBP10.65□□□□□ -0.7
TMEM258-201ENST00000257262 PODNQ7Z5L7 613 aa10.65□□□□□ -0.7
TMEM258-201ENST00000257262 PSME4Q14997 1843 aa10.65□□□□□ -0.71
TMEM258-201ENST00000257262 SCN9AQ15858 1988 aa10.65□□□□□ -0.71
TMEM258-201ENST00000257262 MROH5Q6ZUA9 1318 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 IRS2Q9Y4H2 1338 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 GNAI2P04899 355 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 PYGBP11216 843 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
TMEM258-201ENST00000257262 GMPSP49915 693 aaPredicted RBP10.64□□□□□ -0.71
TMEM258-201ENST00000257262 ITPRIPQ8IWB1 547 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 COA1Q9GZY4 146 aa10.64□□□□□ -0.71
TMEM258-201ENST00000257262 ZNF646O15015 1829 aaPredicted RBP10.63□□□□□ -0.71
TMEM258-201ENST00000257262 EYA2O00167 538 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 PDE8BO95263 885 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
TMEM258-201ENST00000257262 MS4A1P11836 297 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 UBE4AQ14139 1066 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 EAPPQ56P03 285 aaPredicted RBP10.63□□□□□ -0.71
TMEM258-201ENST00000257262 METTL24Q5JXM2 366 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 C15orf52Q6ZUT6 534 aaKnown RBP10.63□□□□□ -0.71
TMEM258-201ENST00000257262 PNMA8AQ86V59 439 aaPredicted RBP10.63□□□□□ -0.71
TMEM258-201ENST00000257262 SLC39A7Q92504 469 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 SIL1Q9H173 461 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 GPRC5DQ9NZD1 345 aa10.63□□□□□ -0.71
TMEM258-201ENST00000257262 ADAMTSL1Q8N6G6 1762 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 SRGAP3O43295 1099 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 FSTL1Q12841 308 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 MTX1Q13505 466 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 VGLL2Q8N8G2 317 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 SMC1BQ8NDV3 1235 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 DPF2Q92785 391 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms