RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
LAMA5-201ENST00000252999 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
LAMA5-201ENST00000252999 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
LAMA5-201ENST00000252999 CCDC65Q8IXS2 484 aa12.89□□□□□ -0.35
LAMA5-201ENST00000252999 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
LAMA5-201ENST00000252999 RASA3Q14644 834 aa12.89□□□□□ -0.35
LAMA5-201ENST00000252999 USP37Q86T82 979 aa12.89□□□□□ -0.35
LAMA5-201ENST00000252999 NDUFAB1O14561 156 aa12.89□□□□□ -0.35
LAMA5-201ENST00000252999 WDHD1O75717 1129 aaPredicted RBP12.89□□□□□ -0.35
LAMA5-201ENST00000252999 SPAG1Q07617 926 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 SDCCAG8Q86SQ7 713 aaPredicted RBP12.88□□□□□ -0.35
LAMA5-201ENST00000252999 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
LAMA5-201ENST00000252999 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 TBC1D31Q96DN5 1066 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 MRRFQ96E11 262 aaKnown RBP12.88□□□□□ -0.35
LAMA5-201ENST00000252999 PDE4BQ07343 736 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 INF2Q27J81 1249 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 CLUL1Q15846 466 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 HEATR3Q7Z4Q2 680 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 F6X3S4 739 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 XRCC6P12956 609 aaKnown RBP eCLIP12.88□□□□□ -0.359e-13■■■■■ 52.6
LAMA5-201ENST00000252999 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.88□□□□□ -0.35
LAMA5-201ENST00000252999 TNNC1P63316 161 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 PPANQ9NQ55 473 aaKnown RBP12.88□□□□□ -0.35
LAMA5-201ENST00000252999 ERCC6LQ2NKX8 1250 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 CCDC38Q502W7 563 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 AKNAD1Q5T1N1 836 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 FAM13AO94988 1023 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
LAMA5-201ENST00000252999 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 TSGA10Q9BZW7 698 aa12.88□□□□□ -0.35
LAMA5-201ENST00000252999 NBPF8Q3BBV2 869 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
LAMA5-201ENST00000252999 SNRKQ9NRH2 765 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 ATP5DP30049 168 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 CEP128Q6ZU80 1094 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
LAMA5-201ENST00000252999 LRRC43Q8N309 656 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 HMG20BQ9P0W2 317 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
LAMA5-201ENST00000252999 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 RNASE9P60153 205 aaKnown RBP12.87□□□□□ -0.35
LAMA5-201ENST00000252999 TUBB4BP68371 445 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 CALCOCO2Q13137 446 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 FMNL3Q8IVF7 1028 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 VCXQ9H320 206 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 SH2D4BQ5SQS7 431 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 GBP5Q96PP8 586 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.356e-7■■■■□ 25.7
LAMA5-201ENST00000252999 MAP7Q14244 749 aa12.87□□□□□ -0.35
LAMA5-201ENST00000252999 DACT3Q96B18 629 aaPredicted RBP12.87□□□□□ -0.35
LAMA5-201ENST00000252999 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 RTEL1-TNFRSF6BF6WH68 1400 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 GAS8O95995 478 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 SEL1L2Q5TEA6 688 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 CETN3O15182 167 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 RTN1Q16799 776 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.352e-10■□□□□ 8.4
LAMA5-201ENST00000252999 WTAPQ15007 396 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
LAMA5-201ENST00000252999 E7EVH7 732 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 STMN1P16949 149 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 MCM7P33993 719 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 PHLDB2Q86SQ0 1253 aa12.86□□□□□ -0.35
LAMA5-201ENST00000252999 KLF18A0A0U1RQI7 1052 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 GOLGA6CA6NDK9 693 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 GOLGA6DP0CG33 693 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 CCDC122Q5T0U0 273 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 DHX58Q96C10 678 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 ALG1Q9BT22 464 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 GOLGA6AQ9NYA3 693 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 CALM1P0DP23 149 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 CALM2P0DP24 149 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 CALM3P0DP25 149 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
LAMA5-201ENST00000252999 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
LAMA5-201ENST00000252999 EVCP57679 992 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
LAMA5-201ENST00000252999 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 STX8Q9UNK0 236 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
LAMA5-201ENST00000252999 MORC4Q8TE76 937 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
LAMA5-201ENST00000252999 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 275.8 ms