RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 ZMYND15Q9H091 742 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 KDM2BQ8NHM5 1336 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 A0A0G2JLW4 131 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 ATP2B3Q16720 1220 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 PLEKHF1Q96S99 279 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 NUP88Q99567 741 aaPredicted RBP5.43□□□□□ -1.54
RAP1B-201ENST00000250559 RNF113AO15541 343 aaKnown RBP5.43□□□□□ -1.54
RAP1B-201ENST00000250559 RNF169Q8NCN4 708 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 SMCR8Q8TEV9 937 aaPredicted RBP5.43□□□□□ -1.54
RAP1B-201ENST00000250559 ERCC6L2Q5T890 1561 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 KDM5AP29375 1690 aaKnown RBP5.43□□□□□ -1.54
RAP1B-201ENST00000250559 RAD17O75943 681 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 ITGA6P23229 1130 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 LRSAM1Q6UWE0 723 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 EDC3Q96F86 508 aaKnown RBP5.43□□□□□ -1.54
RAP1B-201ENST00000250559 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 CEP131Q9UPN4 1083 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 TCP10L2B9ZVM9 353 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 UBE2HP62256 183 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 TMC6Q7Z403 805 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 MAGEB6Q8N7X4 407 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 CCDC112Q8NEF3 446 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 CCDC102AQ96A19 550 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 CCDC194A0A1B0GVG4 234 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 PRAMEF22A3QJZ6 481 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 CTCFLQ8NI51 663 aaPredicted RBP5.43□□□□□ -1.54
RAP1B-201ENST00000250559 CENPHQ9H3R5 247 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 DACT1Q9NYF0 836 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 PLXNC1O60486 1568 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 MYO5CQ9NQX4 1742 aa5.43□□□□□ -1.54
RAP1B-201ENST00000250559 URI1O94763 535 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 FMNL1O95466 1100 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 IRS4O14654 1257 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 TOP1P11387 765 aaKnown RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 XRCC6P12956 609 aaKnown RBP eCLIP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 LTKP29376 864 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CHAMP1Q96JM3 812 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 DNAJC25Q9H1X3 360 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 FAM170AA1A519 330 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 SPECC1Q5M775 1068 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 DCPSQ96C86 337 aaKnown RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 DBNDD2Q9BQY9 259 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 TTC12Q9H892 705 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 PTPDC1A2A3K4 754 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 MYBP10242 640 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ABCA8O94911 1581 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ZFYVE16Q7Z3T8 1539 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 SOS1Q07889 1333 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 TCERG1LQ5VWI1 586 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ANKRD18AQ8IVF6 992 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CRNKL1Q9BZJ0 848 aaKnown RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ZNF287Q9HBT7 754 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 PCDH11XQ9BZA7 1347 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 PCDH11YQ9BZA8 1340 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 TIMM10P62072 90 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 PLIN2Q99541 437 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 USP26Q9BXU7 913 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ARMT1Q9H993 441 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 DDX19AQ9NUU7 478 aaKnown RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ORC3Q9UBD5 711 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 SBNO1A3KN83 1393 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CCDC196A0A1B0GTZ2 297 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 UQCRFS1P1P0C7P4 283 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CCDC178Q5BJE1 867 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 NIM1KQ8IY84 436 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 FAM161BQ96MY7 647 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ARHGEF5Q12774 1597 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 MBD5Q9P267 1494 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 MAGEB6P1A0A0J9YX57 407 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 IGFBP4P22692 258 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 SCAND2PQ9GZW5 306 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 SLC52A2Q9HAB3 445 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 PRC1O43663 620 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 PDE4BQ07343 736 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 NKX1-1Q15270 411 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 Q3C1V9 767 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 FAM117BQ6P1L5 589 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CATIPQ7Z7H3 387 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CREB3L3Q68CJ9 461 aa5.42□□□□□ -1.54
RAP1B-201ENST00000250559 ZNF397Q8NF99 534 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 GPR101Q96P66 508 aaPredicted RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 CDC5LQ99459 802 aaKnown RBP5.42□□□□□ -1.54
RAP1B-201ENST00000250559 TSPY3P0CV98 308 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 TSPY8P0CW00 308 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 TEX13AQ9BXU3 409 aaPredicted RBP5.41□□□□□ -1.54
RAP1B-201ENST00000250559 DCAF5Q96JK2 942 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 EPB41L2O43491 1005 aaKnown RBP5.41□□□□□ -1.54
RAP1B-201ENST00000250559 IP6K1Q92551 441 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 NCOA5Q9HCD5 579 aaKnown RBP5.41□□□□□ -1.54
RAP1B-201ENST00000250559 GADD45BO75293 160 aaPredicted RBP5.41□□□□□ -1.54
RAP1B-201ENST00000250559 WTAPQ15007 396 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 SH2B1Q9NRF2 756 aaPredicted RBP5.41□□□□□ -1.54
RAP1B-201ENST00000250559 ZBTB21Q9ULJ3 1066 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 A0A1B0GUL7 405 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 IL2RBP14784 551 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 HTRA3P83110 453 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 TAF3Q5VWG9 929 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 SYNE4Q8N205 404 aa5.41□□□□□ -1.54
RAP1B-201ENST00000250559 RNF41Q9H4P4 317 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms