RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TIMM10P62072 90 aa15.79■□□□□ 0.12
LSM8-201ENST00000249299 SKAP1Q86WV1 359 aa15.79■□□□□ 0.12
LSM8-201ENST00000249299 XAGE2Q96GT9 111 aa15.79■□□□□ 0.12
LSM8-201ENST00000249299 NEUROD6Q96NK8 337 aa15.79■□□□□ 0.12
LSM8-201ENST00000249299 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
LSM8-201ENST00000249299 GORABQ5T7V8 394 aa15.78■□□□□ 0.12
LSM8-201ENST00000249299 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
LSM8-201ENST00000249299 DBNDD2Q9BQY9 259 aa15.78■□□□□ 0.12
LSM8-201ENST00000249299 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.12
LSM8-201ENST00000249299 IGSF3O75054 1194 aa15.77■□□□□ 0.12
LSM8-201ENST00000249299 GSPT1P15170 499 aaKnown RBP15.77■□□□□ 0.12
LSM8-201ENST00000249299 ATP2B4P23634 1241 aa15.77■□□□□ 0.12
LSM8-201ENST00000249299 PTGER2P43116 358 aa15.77■□□□□ 0.12
LSM8-201ENST00000249299 SPON1Q9HCB6 807 aa15.77■□□□□ 0.12
LSM8-201ENST00000249299 ANKRD31Q8N7Z5 1873 aa15.77■□□□□ 0.12
LSM8-201ENST00000249299 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
LSM8-201ENST00000249299 EVI5LQ96CN4 794 aa15.76■□□□□ 0.11
LSM8-201ENST00000249299 HAUS7Q99871 368 aa15.76■□□□□ 0.11
LSM8-201ENST00000249299 TLR7Q9NYK1 1049 aaKnown RBP15.76■□□□□ 0.11
LSM8-201ENST00000249299 ZNF804BA4D1E1 1349 aa15.76■□□□□ 0.11
LSM8-201ENST00000249299 SEMA3EO15041 775 aa15.75■□□□□ 0.11
LSM8-201ENST00000249299 TAF5LO75529 589 aa15.75■□□□□ 0.11
LSM8-201ENST00000249299 SDSP20132 328 aa15.75■□□□□ 0.11
LSM8-201ENST00000249299 ARID4AP29374 1257 aaPredicted RBP15.75■□□□□ 0.11
LSM8-201ENST00000249299 KCNJ4P48050 445 aa15.75■□□□□ 0.11
LSM8-201ENST00000249299 CAVIN4Q5BKX8 364 aa15.75■□□□□ 0.11
LSM8-201ENST00000249299 HELBQ8NG08 1087 aaPredicted RBP15.75■□□□□ 0.11
LSM8-201ENST00000249299 ZNF622Q969S3 477 aaKnown RBP eCLIP15.75■□□□□ 0.11
LSM8-201ENST00000249299 GNL3LQ9NVN8 582 aaKnown RBP15.75■□□□□ 0.11
LSM8-201ENST00000249299 ANKIB1Q9P2G1 1089 aa15.75■□□□□ 0.11
LSM8-201ENST00000249299 PSDA5PKW4 1024 aaPredicted RBP15.74■□□□□ 0.11
LSM8-201ENST00000249299 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 SOGA3Q5TF21 947 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 PRPF40BQ6NWY9 871 aaKnown RBP15.74■□□□□ 0.11
LSM8-201ENST00000249299 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 FBXO33Q7Z6M2 555 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 IFNLR1Q8IU57 520 aaPredicted RBP15.74■□□□□ 0.11
LSM8-201ENST00000249299 TTLL6Q8N841 843 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 C7orf43Q8WVR3 580 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 GGA1Q9UJY5 639 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 PDS5AQ29RF7 1337 aaKnown RBP15.74■□□□□ 0.11
LSM8-201ENST00000249299 RFX7Q2KHR2 1363 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 KIF13BQ9NQT8 1826 aa15.74■□□□□ 0.11
LSM8-201ENST00000249299 HIP1O00291 1037 aa15.73■□□□□ 0.11
LSM8-201ENST00000249299 CDC45O75419 566 aa15.73■□□□□ 0.11
LSM8-201ENST00000249299 LRRFIP1Q32MZ4 808 aaKnown RBP15.73■□□□□ 0.11
LSM8-201ENST00000249299 TMED8Q6PL24 325 aaPredicted RBP15.73■□□□□ 0.11
LSM8-201ENST00000249299 BACH2Q9BYV9 841 aa15.73■□□□□ 0.11
LSM8-201ENST00000249299 COL4A1P02462 1669 aa15.73■□□□□ 0.11
LSM8-201ENST00000249299 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
LSM8-201ENST00000249299 KCNA3P22001 575 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 CHRNA5P30532 468 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 ADORA1P30542 326 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 GPSM2P81274 684 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
LSM8-201ENST00000249299 MPNDQ8N594 471 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
LSM8-201ENST00000249299 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 NSFL1CQ9UNZ2 370 aaKnown RBP15.72■□□□□ 0.11
LSM8-201ENST00000249299 IRS2Q9Y4H2 1338 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 LRRC37AA6NMS7 1700 aa15.72■□□□□ 0.11
LSM8-201ENST00000249299 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
LSM8-201ENST00000249299 C8orf34Q49A92 452 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 TSHZ3Q63HK5 1081 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 SUPT20HQ8NEM7 779 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 VPS33BQ9H267 617 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 BOLA2Q9H3K6 86 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 MED23Q9ULK4 1368 aa15.71■□□□□ 0.11
LSM8-201ENST00000249299 DPEP1P16444 411 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 HIBADHP31937 336 aaKnown RBP15.7■□□□□ 0.1
LSM8-201ENST00000249299 PHKA1P46020 1223 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 VPS37DQ86XT2 251 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 RTKN2Q8IZC4 609 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 FAM84BQ96KN1 310 aaPredicted RBP15.7■□□□□ 0.1
LSM8-201ENST00000249299 EYA3Q99504 573 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 COL11A2P13942 1736 aaPredicted RBP15.7■□□□□ 0.1
LSM8-201ENST00000249299 ARAP2Q8WZ64 1704 aa15.7■□□□□ 0.1
LSM8-201ENST00000249299 EPB41L2O43491 1005 aaKnown RBP15.69■□□□□ 0.1
LSM8-201ENST00000249299 UFL1O94874 794 aa15.69■□□□□ 0.1
LSM8-201ENST00000249299 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
LSM8-201ENST00000249299 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
LSM8-201ENST00000249299 KBTBD3Q8NAB2 608 aa15.69■□□□□ 0.1
LSM8-201ENST00000249299 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
LSM8-201ENST00000249299 DENND2AQ9ULE3 1009 aa15.69■□□□□ 0.1
LSM8-201ENST00000249299 ZFYP08048 801 aaPredicted RBP15.68■□□□□ 0.1
LSM8-201ENST00000249299 BCAMP50895 628 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 CCDC93Q567U6 631 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 RUFY2Q8WXA3 655 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 RILPL2Q969X0 211 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 SPEF2Q9C093 1822 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 DLEC1Q9Y238 1755 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 A0A0G2JLW4 131 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 SNAP23O00161 211 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 HAX1O00165 279 aa15.68■□□□□ 0.1
LSM8-201ENST00000249299 MCAMP43121 646 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 893.9 ms