RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 MAP3K11Q16584 847 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 ZSCAN25Q6NSZ9 544 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 NARFQ9UHQ1 456 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 TSPYL4Q9UJ04 414 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 NOC2LQ9Y3T9 749 aaKnown RBP4.3□□□□□ -1.72
PHTF2-201ENST00000248550 ERBB3P21860 1342 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 HOXC6P09630 235 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 SUPT20HL2P0C7V6 817 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 MCTP2Q6DN12 878 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 ZNF790Q6PG37 636 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 DDX21Q9NR30 783 aaKnown RBP eCLIP4.3□□□□□ -1.72
PHTF2-201ENST00000248550 PXDNLA1KZ92 1463 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 CRYBG1Q9Y4K1 1723 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 SLC4A3P48751 1232 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 NCAPD2Q15021 1401 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 NUP188Q5SRE5 1749 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 HMMRO75330 724 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 MYCP01106 439 aaPredicted RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 RGS2P41220 211 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 HSP90AB4PQ58FF6 505 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 LRSAM1Q6UWE0 723 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 NCDNQ9UBB6 729 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 FBXL21Q9UKT6 434 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 CD163L1Q9NR16 1453 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 KDM4AO75164 1064 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 RPLP2P05387 115 aaKnown RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 ATXN8OSP0DMR3 200 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 PPM1FP49593 454 aaPredicted RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 KCTD2Q14681 263 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 TAF12Q16514 161 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 CCDC30Q5VVM6 783 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 MICALL2Q8IY33 904 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 DDX1Q92499 740 aaKnown RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 NUDT12Q9BQG2 462 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 THEGQ9P2T0 379 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 CNOT7Q9UIV1 285 aaKnown RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 CICQ96RK0 1608 aaPredicted RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 RIMBP2O15034 1052 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 SOCS4Q8WXH5 440 aa4.29□□□□□ -1.72
PHTF2-201ENST00000248550 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 G3BP2Q9UN86 482 aaKnown RBP4.29□□□□□ -1.72
PHTF2-201ENST00000248550 FLT4P35916 1363 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 FGD1P98174 961 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 CHAF1AQ13111 956 aaPredicted RBP4.28□□□□□ -1.72
PHTF2-201ENST00000248550 IL31Q6EBC2 164 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 NUDT18Q6ZVK8 323 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 MICAL1Q8TDZ2 1067 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 CEP131Q9UPN4 1083 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 AKAP2Q9Y2D5 859 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 ZNF831Q5JPB2 1677 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 CCL15-CCL14A0A0B4J2E2 113 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 USP17L3A6NCW0 530 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 USP17L4A6NCW7 530 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 ZBED4O75132 1171 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 ECM2O94769 699 aaPredicted RBP4.28□□□□□ -1.72
PHTF2-201ENST00000248550 IL6STP40189 918 aaPredicted RBP4.28□□□□□ -1.72
PHTF2-201ENST00000248550 CCL15Q16663 113 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 USPL1Q5W0Q7 1092 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 MAP1SQ66K74 1059 aaPredicted RBP4.28□□□□□ -1.72
PHTF2-201ENST00000248550 SYNE3Q6ZMZ3 975 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 USP17L1Q7RTZ2 530 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 ARHGEF25Q86VW2 580 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 NUP133Q8WUM0 1156 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 ARHGEF10LQ9HCE6 1279 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 TOMM22Q9NS69 142 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 RWDD3Q9Y3V2 267 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 SH3TC1Q8TE82 1336 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 AGBL3Q8NEM8 1001 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 P2RX7Q99572 595 aaKnown RBP4.28□□□□□ -1.72
PHTF2-201ENST00000248550 SIL1Q9H173 461 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 COG5Q9UP83 839 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 LRRC37A3O60309 1634 aa4.28□□□□□ -1.72
PHTF2-201ENST00000248550 VEGFBP49765 207 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 MRPS5P82675 430 aaKnown RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 PSRC1Q6PGN9 363 aaPredicted RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 CASC1Q6TDU7 716 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 PCSK9Q8NBP7 692 aaKnown RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.27□□□□□ -1.738e-7■■□□□ 12
PHTF2-201ENST00000248550 ANKRD26Q9UPS8 1709 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 GPR25O00155 361 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 TULP1O00294 542 aaPredicted RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 IFIT5Q13325 482 aaKnown RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 BFSP2Q13515 415 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 HSP90AA2PQ14568 343 aaPredicted RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 CCDC158Q5M9N0 1113 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 SKAP1Q86WV1 359 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 COL23A1Q86Y22 540 aaPredicted RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 CCDC117Q8IWD4 279 aaPredicted RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 VSIG10Q8N0Z9 540 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 KIF12Q96FN5 646 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 CRAMP1Q96RY5 1269 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 NACAP1Q9BZK3 213 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 LGR6Q9HBX8 967 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 PLIN1O60240 522 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 HSPA8P11142 646 aaKnown RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 ATXN3P54252 364 aaPredicted RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 CHMP4BP1P59074 171 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 AMPD2Q01433 879 aa4.27□□□□□ -1.73
PHTF2-201ENST00000248550 AIMP1Q12904 312 aaKnown RBP4.27□□□□□ -1.73
PHTF2-201ENST00000248550 G3BP1Q13283 466 aaKnown RBP eCLIP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms