RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 TFIP11Q9UBB9 837 aaKnown RBP31.05■■■□□ 2.56
RTN2-201ENST00000245923 LIG1P18858 919 aa31.05■■■□□ 2.56
RTN2-201ENST00000245923 HSP90AB3PQ58FF7 597 aa31.05■■■□□ 2.56
RTN2-201ENST00000245923 NLRP10Q86W26 655 aa31.05■■■□□ 2.56
RTN2-201ENST00000245923 USP25Q9UHP3 1055 aa31.05■■■□□ 2.56
RTN2-201ENST00000245923 HLFQ16534 295 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 FBXL16Q8N461 479 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 CCDC85AQ96PX6 553 aaPredicted RBP31.04■■■□□ 2.56
RTN2-201ENST00000245923 PLCH1Q4KWH8 1693 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 H3BQV1 296 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 APOBRQ0VD83 1088 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 IFFO2Q5TF58 517 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 DDX11Q96FC9 970 aa31.04■■■□□ 2.56
RTN2-201ENST00000245923 CYP19A1P11511 503 aaPredicted RBP31.03■■■□□ 2.56
RTN2-201ENST00000245923 HMGN5P82970 282 aaKnown RBP31.03■■■□□ 2.56
RTN2-201ENST00000245923 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.03■■■□□ 2.56
RTN2-201ENST00000245923 RIPOR2Q9Y4F9 1068 aa31.03■■■□□ 2.56
RTN2-201ENST00000245923 CTDNEP1O95476 244 aa31.03■■■□□ 2.56
RTN2-201ENST00000245923 NUP62CLQ9H1M0 184 aa31.03■■■□□ 2.56
RTN2-201ENST00000245923 CTNNA3Q9UI47 895 aa31.03■■■□□ 2.56
RTN2-201ENST00000245923 KDM4AO75164 1064 aa31.02■■■□□ 2.56
RTN2-201ENST00000245923 CCDC192P0DO97 292 aa31.02■■■□□ 2.56
RTN2-201ENST00000245923 SCARF1Q14162 830 aa31.02■■■□□ 2.56
RTN2-201ENST00000245923 NAA16Q6N069 864 aaPredicted RBP31.02■■■□□ 2.56
RTN2-201ENST00000245923 ZNF274Q96GC6 653 aaPredicted RBP31.02■■■□□ 2.56
RTN2-201ENST00000245923 NUP98P52948 1817 aa31.02■■■□□ 2.56
RTN2-201ENST00000245923 PTMAP06454 111 aaKnown RBP31.01■■■□□ 2.56
RTN2-201ENST00000245923 TTLL11Q8NHH1 800 aa31.01■■■□□ 2.56
RTN2-201ENST00000245923 SLC4A9Q96Q91 983 aa31.01■■■□□ 2.56
RTN2-201ENST00000245923 AKAP11Q9UKA4 1901 aa31.01■■■□□ 2.56
RTN2-201ENST00000245923 FOXP2O15409 715 aa31.01■■■□□ 2.55
RTN2-201ENST00000245923 MAP3K11Q16584 847 aa31.01■■■□□ 2.55
RTN2-201ENST00000245923 SYNE4Q8N205 404 aa31.01■■■□□ 2.55
RTN2-201ENST00000245923 GOLGA6L4A6NEF3 574 aa31■■■□□ 2.55
RTN2-201ENST00000245923 ADCY5O95622 1261 aa31■■■□□ 2.55
RTN2-201ENST00000245923 TTLL5Q6EMB2 1281 aa31■■■□□ 2.55
RTN2-201ENST00000245923 ZAP70P43403 619 aa31■■■□□ 2.55
RTN2-201ENST00000245923 ATP2B3Q16720 1220 aa31■■■□□ 2.55
RTN2-201ENST00000245923 APPBP2Q92624 585 aa31■■■□□ 2.55
RTN2-201ENST00000245923 DDX19AQ9NUU7 478 aaKnown RBP31■■■□□ 2.55
RTN2-201ENST00000245923 KIF3AQ9Y496 699 aa31■■■□□ 2.55
RTN2-201ENST00000245923 SALL1Q9NSC2 1324 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 PTPDC1A2A3K4 754 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 GPTP24298 496 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 CHMP4CQ96CF2 233 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 ITGA6P23229 1130 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 CTSWP56202 376 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 EVCP57679 992 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 WASHC4Q2M389 1173 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 GREM2Q9H772 168 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 CFAP45Q9UL16 551 aa30.99■■■□□ 2.55
RTN2-201ENST00000245923 PDIA3P30101 505 aaKnown RBP30.98■■■□□ 2.55
RTN2-201ENST00000245923 METTL24Q5JXM2 366 aa30.98■■■□□ 2.55
RTN2-201ENST00000245923 PGBD1Q96JS3 809 aa30.98■■■□□ 2.55
RTN2-201ENST00000245923 DACT1Q9NYF0 836 aa30.98■■■□□ 2.55
RTN2-201ENST00000245923 LDHAL6AQ6ZMR3 332 aa30.98■■■□□ 2.55
RTN2-201ENST00000245923 RBM43Q6ZSC3 357 aaKnown RBP30.97■■■□□ 2.55
RTN2-201ENST00000245923 ZNF512BQ96KM6 892 aaPredicted RBP30.97■■■□□ 2.55
RTN2-201ENST00000245923 WNK3Q9BYP7 1800 aa30.97■■■□□ 2.55
RTN2-201ENST00000245923 KDM4FA0A1W2PPD8 638 aa30.96■■■□□ 2.55
RTN2-201ENST00000245923 ANKRD18BA2A2Z9 1011 aa30.96■■■□□ 2.55
RTN2-201ENST00000245923 DDX60Q8IY21 1712 aaKnown RBP30.96■■■□□ 2.55
RTN2-201ENST00000245923 IMMTQ16891 758 aaKnown RBP30.96■■■□□ 2.55
RTN2-201ENST00000245923 ZBTB1Q9Y2K1 713 aa30.96■■■□□ 2.55
RTN2-201ENST00000245923 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.96■■■□□ 2.55
RTN2-201ENST00000245923 CCT2P78371 535 aaKnown RBP30.95■■■□□ 2.55
RTN2-201ENST00000245923 KAT6BQ8WYB5 2073 aa30.95■■■□□ 2.54
RTN2-201ENST00000245923 IRS4O14654 1257 aaPredicted RBP30.95■■■□□ 2.54
RTN2-201ENST00000245923 ADD1P35611 737 aaKnown RBP30.95■■■□□ 2.54
RTN2-201ENST00000245923 VGLL2Q8N8G2 317 aa30.95■■■□□ 2.54
RTN2-201ENST00000245923 TNMDQ9H2S6 317 aa30.95■■■□□ 2.54
RTN2-201ENST00000245923 CLSTN2Q9H4D0 955 aa30.95■■■□□ 2.54
RTN2-201ENST00000245923 ERVV-1B6SEH8 477 aa30.94■■■□□ 2.54
RTN2-201ENST00000245923 FGAP02671 866 aa30.94■■■□□ 2.54
RTN2-201ENST00000245923 PUS7LQ9H0K6 701 aaKnown RBP30.94■■■□□ 2.54
RTN2-201ENST00000245923 CAMK4Q16566 473 aa30.94■■■□□ 2.54
RTN2-201ENST00000245923 CHST3Q7LGC8 479 aa30.94■■■□□ 2.54
RTN2-201ENST00000245923 NCOA5Q9HCD5 579 aaKnown RBP30.94■■■□□ 2.54
RTN2-201ENST00000245923 MCAMP43121 646 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 TYRO3Q06418 890 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 PI16Q6UXB8 463 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 TPM2P07951 284 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 TERF1P54274 439 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 FAM200AQ8TCP9 573 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 CNNM1Q9NRU3 951 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 MRVI1Q9Y6F6 885 aa30.93■■■□□ 2.54
RTN2-201ENST00000245923 COL16A1Q07092 1604 aaPredicted RBP30.92■■■□□ 2.54
RTN2-201ENST00000245923 EXOC5O00471 708 aa30.92■■■□□ 2.54
RTN2-201ENST00000245923 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.92■■■□□ 2.54
RTN2-201ENST00000245923 TRMT112Q9UI30 125 aaKnown RBP30.92■■■□□ 2.54
RTN2-201ENST00000245923 PDE8AO60658 829 aa30.91■■■□□ 2.54
RTN2-201ENST00000245923 IL6STP40189 918 aaPredicted RBP30.91■■■□□ 2.54
RTN2-201ENST00000245923 ATL3Q6DD88 541 aa30.91■■■□□ 2.54
RTN2-201ENST00000245923 COL22A1Q8NFW1 1626 aaPredicted RBP30.91■■■□□ 2.54
RTN2-201ENST00000245923 BICD2Q8TD16 824 aa30.91■■■□□ 2.54
RTN2-201ENST00000245923 RCOR1Q9UKL0 485 aa30.91■■■□□ 2.54
RTN2-201ENST00000245923 LRP5O75197 1615 aa30.9■■■□□ 2.54
RTN2-201ENST00000245923 ATRNO75882 1429 aa30.9■■■□□ 2.54
RTN2-201ENST00000245923 GPAA1O43292 621 aa30.9■■■□□ 2.54
RTN2-201ENST00000245923 NR1I2O75469 434 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms