RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 SCAF8Q9UPN6 1271 aaKnown RBP20.53■□□□□ 0.88
CLPP-201ENST00000245816 A0A1B0GUL6 1792 aa20.52■□□□□ 0.88
CLPP-201ENST00000245816 HSPA8P11142 646 aaKnown RBP20.52■□□□□ 0.88
CLPP-201ENST00000245816 PODNQ7Z5L7 613 aa20.52■□□□□ 0.88
CLPP-201ENST00000245816 USP17L3A6NCW0 530 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 USP17L4A6NCW7 530 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 LBX1P52954 281 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 CHRNDQ07001 517 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 GRM1Q13255 1194 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 USP17L1Q7RTZ2 530 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 MRPL50Q8N5N7 158 aaKnown RBP20.51■□□□□ 0.87
CLPP-201ENST00000245816 AGBL3Q8NEM8 1001 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 HELBQ8NG08 1087 aaPredicted RBP20.51■□□□□ 0.87
CLPP-201ENST00000245816 CDCA7LQ96GN5 454 aa20.51■□□□□ 0.87
CLPP-201ENST00000245816 ZNF594Q96JF6 807 aaPredicted RBP20.51■□□□□ 0.87
CLPP-201ENST00000245816 TAF5LO75529 589 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 SCARF1Q14162 830 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 KRT26Q7Z3Y9 468 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 GGA3Q9NZ52 723 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 LEMD3Q9Y2U8 911 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 ZNF804BA4D1E1 1349 aa20.5■□□□□ 0.87
CLPP-201ENST00000245816 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
CLPP-201ENST00000245816 G3V3G9 751 aa20.48■□□□□ 0.87
CLPP-201ENST00000245816 GRM8O00222 908 aa20.48■□□□□ 0.87
CLPP-201ENST00000245816 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
CLPP-201ENST00000245816 DCAF8Q5TAQ9 597 aa20.48■□□□□ 0.87
CLPP-201ENST00000245816 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
CLPP-201ENST00000245816 MYOZ2Q9NPC6 264 aa20.48■□□□□ 0.87
CLPP-201ENST00000245816 PRDM10Q9NQV6 1147 aa20.48■□□□□ 0.87
CLPP-201ENST00000245816 FAM155AB1AL88 458 aaPredicted RBP20.47■□□□□ 0.87
CLPP-201ENST00000245816 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
CLPP-201ENST00000245816 USP17L8P0C7I0 530 aa20.47■□□□□ 0.87
CLPP-201ENST00000245816 NBPF9Q3BBW0 867 aa20.47■□□□□ 0.87
CLPP-201ENST00000245816 ALDH1L2Q3SY69 923 aa20.47■□□□□ 0.87
CLPP-201ENST00000245816 ANGEL2Q5VTE6 544 aaKnown RBP20.47■□□□□ 0.87
CLPP-201ENST00000245816 PAXIP1Q6ZW49 1069 aaPredicted RBP20.47■□□□□ 0.87
CLPP-201ENST00000245816 HHIPL1Q96JK4 782 aa20.47■□□□□ 0.87
CLPP-201ENST00000245816 COA1Q9GZY4 146 aa20.47■□□□□ 0.87
CLPP-201ENST00000245816 ANKRD18BA2A2Z9 1011 aa20.46■□□□□ 0.87
CLPP-201ENST00000245816 CAPN15O75808 1086 aa20.46■□□□□ 0.87
CLPP-201ENST00000245816 CERS5Q8N5B7 392 aa20.46■□□□□ 0.87
CLPP-201ENST00000245816 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
CLPP-201ENST00000245816 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
CLPP-201ENST00000245816 ECE1P42892 770 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
CLPP-201ENST00000245816 STRIP1Q5VSL9 837 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 SLC4A10Q6U841 1118 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 DCPSQ96C86 337 aaKnown RBP20.45■□□□□ 0.86
CLPP-201ENST00000245816 CDCA5Q96FF9 252 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 PUS3Q9BZE2 481 aaKnown RBP20.45■□□□□ 0.86
CLPP-201ENST00000245816 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 PCDHAC2Q9Y5I4 1007 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 UTYO14607 1347 aa20.45■□□□□ 0.86
CLPP-201ENST00000245816 ALDH1L1O75891 902 aa20.44■□□□□ 0.86
CLPP-201ENST00000245816 MAP2K2P36507 400 aa20.44■□□□□ 0.86
CLPP-201ENST00000245816 HUNKP57058 714 aa20.44■□□□□ 0.86
CLPP-201ENST00000245816 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
CLPP-201ENST00000245816 ZBED3Q96IU2 234 aaPredicted RBP20.44■□□□□ 0.86
CLPP-201ENST00000245816 GBA2Q9HCG7 927 aaPredicted RBP20.44■□□□□ 0.86
CLPP-201ENST00000245816 CD209Q9NNX6 404 aa20.44■□□□□ 0.86
CLPP-201ENST00000245816 PTPRCP08575 1304 aa20.44■□□□□ 0.86
CLPP-201ENST00000245816 IFIT5Q13325 482 aaKnown RBP20.43■□□□□ 0.86
CLPP-201ENST00000245816 C15orf52Q6ZUT6 534 aaKnown RBP20.43■□□□□ 0.86
CLPP-201ENST00000245816 MOB2Q70IA6 237 aa20.43■□□□□ 0.86
CLPP-201ENST00000245816 ANKRD44Q8N8A2 993 aa20.43■□□□□ 0.86
CLPP-201ENST00000245816 AIDAQ96BJ3 306 aa20.43■□□□□ 0.86
CLPP-201ENST00000245816 SRCIN1Q9C0H9 1055 aa20.43■□□□□ 0.86
CLPP-201ENST00000245816 AOX1Q06278 1338 aa20.43■□□□□ 0.86
CLPP-201ENST00000245816 WNT10BO00744 389 aa20.42■□□□□ 0.86
CLPP-201ENST00000245816 BRPF1P55201 1214 aaPredicted RBP20.42■□□□□ 0.86
CLPP-201ENST00000245816 GTF2IP78347 998 aa20.42■□□□□ 0.86
CLPP-201ENST00000245816 TTLL5Q6EMB2 1281 aa20.42■□□□□ 0.86
CLPP-201ENST00000245816 CHMP3Q9Y3E7 222 aa20.42■□□□□ 0.86
CLPP-201ENST00000245816 FBXW7Q969H0 707 aa20.41■□□□□ 0.86
CLPP-201ENST00000245816 SASH1O94885 1247 aa20.4■□□□□ 0.86
CLPP-201ENST00000245816 RGMBQ6NW40 437 aa20.4■□□□□ 0.86
CLPP-201ENST00000245816 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
CLPP-201ENST00000245816 C9orf78Q9NZ63 289 aaPredicted RBP20.4■□□□□ 0.86
CLPP-201ENST00000245816 IL1R1P14778 569 aa20.39■□□□□ 0.85
CLPP-201ENST00000245816 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLPP-201ENST00000245816 RABL6Q3YEC7 729 aaPredicted RBP20.39■□□□□ 0.85
CLPP-201ENST00000245816 LDHAL6AQ6ZMR3 332 aa20.39■□□□□ 0.85
CLPP-201ENST00000245816 SULF1Q8IWU6 871 aa20.39■□□□□ 0.85
CLPP-201ENST00000245816 USP44Q9H0E7 712 aa20.39■□□□□ 0.85
CLPP-201ENST00000245816 BICC1Q9H694 974 aaKnown RBP20.39■□□□□ 0.85
CLPP-201ENST00000245816 JAG2Q9Y219 1238 aa20.39■□□□□ 0.85
CLPP-201ENST00000245816 RIPOR2Q9Y4F9 1068 aa20.39■□□□□ 0.85
CLPP-201ENST00000245816 PITPNM2Q9BZ72 1349 aa20.38■□□□□ 0.85
CLPP-201ENST00000245816 PLIN1O60240 522 aa20.38■□□□□ 0.85
CLPP-201ENST00000245816 CCDC57Q2TAC2 916 aa20.37■□□□□ 0.85
CLPP-201ENST00000245816 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
CLPP-201ENST00000245816 C2orf69Q8N8R5 385 aa20.37■□□□□ 0.85
CLPP-201ENST00000245816 KLHDC4Q8TBB5 520 aa20.37■□□□□ 0.85
CLPP-201ENST00000245816 KCNJ4P48050 445 aa20.36■□□□□ 0.85
CLPP-201ENST00000245816 KIF23Q02241 960 aaPredicted RBP20.36■□□□□ 0.85
CLPP-201ENST00000245816 ZBED9Q6R2W3 1325 aa20.35■□□□□ 0.85
CLPP-201ENST00000245816 MYO3BQ8WXR4 1341 aa20.35■□□□□ 0.85
CLPP-201ENST00000245816 SLC10A3P09131 477 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms