RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 LEMD3Q9Y2U8 911 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 ATP2B4P23634 1241 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 MPNDQ8N594 471 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 TBC1D16Q8TBP0 767 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
TREM1-201ENST00000244709 OSBPL3Q9H4L5 887 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 ECHDC1Q9NTX5 307 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 POLLQ9UGP5 575 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 MYH13Q9UKX3 1938 aa14.07□□□□□ -0.16
TREM1-201ENST00000244709 IRS2Q9Y4H2 1338 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 AK9Q5TCS8 1911 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 GORABQ5T7V8 394 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 DPP8Q6V1X1 898 aaPredicted RBP14.06□□□□□ -0.16
TREM1-201ENST00000244709 PI4K2BQ8TCG2 481 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 FER1L6Q2WGJ9 1857 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 AKAP11Q9UKA4 1901 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 AOX1Q06278 1338 aa14.06□□□□□ -0.16
TREM1-201ENST00000244709 SYT17Q9BSW7 474 aa14.05□□□□□ -0.16
TREM1-201ENST00000244709 C6orf229H3BNL8 230 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 PHKA1P46020 1223 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 GYG1P46976 350 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 CCDC158Q5M9N0 1113 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 TTC39AQ5SRH9 613 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 CCDC102BQ68D86 513 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 TXNRD3Q86VQ6 643 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 ERC2O15083 957 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 GSPT1P15170 499 aaKnown RBP14.04□□□□□ -0.16
TREM1-201ENST00000244709 BCAMP50895 628 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 FAM84BQ96KN1 310 aaPredicted RBP14.04□□□□□ -0.16
TREM1-201ENST00000244709 BOLA2Q9H3K6 86 aa14.04□□□□□ -0.16
TREM1-201ENST00000244709 MED23Q9ULK4 1368 aa14.03□□□□□ -0.16
TREM1-201ENST00000244709 GOLGB1Q14789 3259 aaKnown RBP14.03□□□□□ -0.16
TREM1-201ENST00000244709 GLRX3O76003 335 aaKnown RBP14.03□□□□□ -0.16
TREM1-201ENST00000244709 ATP5JP18859 108 aa14.03□□□□□ -0.16
TREM1-201ENST00000244709 SOGA3Q5TF21 947 aa14.03□□□□□ -0.16
TREM1-201ENST00000244709 C15orf52Q6ZUT6 534 aaKnown RBP14.03□□□□□ -0.16
TREM1-201ENST00000244709 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.16
TREM1-201ENST00000244709 ARID4AP29374 1257 aaPredicted RBP14.02□□□□□ -0.16
TREM1-201ENST00000244709 CAVIN4Q5BKX8 364 aa14.02□□□□□ -0.16
TREM1-201ENST00000244709 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.16
TREM1-201ENST00000244709 RTKN2Q8IZC4 609 aa14.02□□□□□ -0.16
TREM1-201ENST00000244709 RTFDC1Q9BY42 306 aaPredicted RBP14.02□□□□□ -0.16
TREM1-201ENST00000244709 NDUFB9Q9Y6M9 179 aa14.02□□□□□ -0.16
TREM1-201ENST00000244709 CHD4Q14839 1912 aa14.02□□□□□ -0.17
TREM1-201ENST00000244709 RIMBP2O15034 1052 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 HIBADHP31937 336 aaKnown RBP14.01□□□□□ -0.17
TREM1-201ENST00000244709 MCAMP43121 646 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 SCARF1Q14162 830 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 VPS37DQ86XT2 251 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
TREM1-201ENST00000244709 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
TREM1-201ENST00000244709 COL1A1P02452 1464 aaPredicted RBP14.01□□□□□ -0.17
TREM1-201ENST00000244709 UQCRFS1P1P0C7P4 283 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 ZNF512BQ96KM6 892 aaPredicted RBP14.01□□□□□ -0.17
TREM1-201ENST00000244709 PSMD1Q99460 953 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 EYA3Q99504 573 aa14.01□□□□□ -0.17
TREM1-201ENST00000244709 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
TREM1-201ENST00000244709 FKBP4Q02790 459 aaKnown RBP eCLIP14□□□□□ -0.17
TREM1-201ENST00000244709 WASHC4Q2M389 1173 aa14□□□□□ -0.17
TREM1-201ENST00000244709 PI16Q6UXB8 463 aa14□□□□□ -0.17
TREM1-201ENST00000244709 ZNF804AQ7Z570 1209 aa14□□□□□ -0.17
TREM1-201ENST00000244709 DNAJC2Q99543 621 aaKnown RBP14□□□□□ -0.17
TREM1-201ENST00000244709 HAUS7Q99871 368 aa14□□□□□ -0.17
TREM1-201ENST00000244709 ZC3H12CQ9C0D7 883 aaKnown RBP14□□□□□ -0.17
TREM1-201ENST00000244709 SNRKQ9NRH2 765 aa14□□□□□ -0.17
TREM1-201ENST00000244709 CCDC88AQ3V6T2 1871 aa13.99□□□□□ -0.17
TREM1-201ENST00000244709 TRIM6-TRIM34B2RNG4 842 aa13.99□□□□□ -0.17
TREM1-201ENST00000244709 RASGRF1Q13972 1273 aa13.99□□□□□ -0.17
TREM1-201ENST00000244709 SUPT20HQ8NEM7 779 aa13.99□□□□□ -0.17
TREM1-201ENST00000244709 EDC3Q96F86 508 aaKnown RBP13.99□□□□□ -0.17
TREM1-201ENST00000244709 GNL3LQ9NVN8 582 aaKnown RBP13.99□□□□□ -0.17
TREM1-201ENST00000244709 MYH7P12883 1935 aa13.99□□□□□ -0.17
TREM1-201ENST00000244709 SDSP20132 328 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 ZAP70P43403 619 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 AOC3Q16853 763 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 RILPL2Q969X0 211 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
TREM1-201ENST00000244709 HMG20BQ9P0W2 317 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 DOCK2Q92608 1830 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 NFKBIEO00221 500 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 GOLIM4O00461 696 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 KIAA2012Q0VF49 1180 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 SPATA5Q8NB90 893 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 TAOK3Q9H2K8 898 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 CD209Q9NNX6 404 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 PAG1Q9NWQ8 432 aa13.98□□□□□ -0.17
TREM1-201ENST00000244709 COL4A5P29400 1685 aa13.97□□□□□ -0.17
TREM1-201ENST00000244709 PPIP5K2O43314 1243 aa13.97□□□□□ -0.17
TREM1-201ENST00000244709 FRAT2O75474 233 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms