RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 TBC1D32Q96NH3 1257 aa15.68■□□□□ 0.1
HIF3A-201ENST00000244302 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
HIF3A-201ENST00000244302 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
HIF3A-201ENST00000244302 GPSM2P81274 684 aa15.67■□□□□ 0.1
HIF3A-201ENST00000244302 NMIQ13287 307 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-201ENST00000244302 ZNF622Q969S3 477 aaKnown RBP eCLIP15.67■□□□□ 0.1
HIF3A-201ENST00000244302 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
HIF3A-201ENST00000244302 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
HIF3A-201ENST00000244302 CYP2E1P05181 493 aaPredicted RBP15.67■□□□□ 0.1
HIF3A-201ENST00000244302 SLC5A1P13866 664 aa15.67■□□□□ 0.1
HIF3A-201ENST00000244302 RBM17Q96I25 401 aaKnown RBP15.67■□□□□ 0.1
HIF3A-201ENST00000244302 USP26Q9BXU7 913 aa15.67■□□□□ 0.1
HIF3A-201ENST00000244302 NSFL1CQ9UNZ2 370 aaKnown RBP15.67■□□□□ 0.1
HIF3A-201ENST00000244302 HOXA10P31260 410 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-201ENST00000244302 SLC4A3P48751 1232 aa15.66■□□□□ 0.1
HIF3A-201ENST00000244302 RASGRF1Q13972 1273 aa15.66■□□□□ 0.1
HIF3A-201ENST00000244302 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
HIF3A-201ENST00000244302 FAM84BQ96KN1 310 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-201ENST00000244302 HMG20BQ9P0W2 317 aa15.66■□□□□ 0.1
HIF3A-201ENST00000244302 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
HIF3A-201ENST00000244302 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
HIF3A-201ENST00000244302 PIH1D3Q9NQM4 214 aaKnown RBP15.65■□□□□ 0.1
HIF3A-201ENST00000244302 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-201ENST00000244302 DAXXQ9UER7 740 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-201ENST00000244302 SGSM2O43147 1006 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 PTH1RQ03431 593 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 KIF2CQ99661 725 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 ANO2Q9NQ90 1003 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 DIAPH3Q9NSV4 1193 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 KCNJ4P48050 445 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 UBE4AQ14139 1066 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 KBTBD3Q8NAB2 608 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 POLLQ9UGP5 575 aa15.64■□□□□ 0.09
HIF3A-201ENST00000244302 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
HIF3A-201ENST00000244302 ARID4AP29374 1257 aaPredicted RBP15.63■□□□□ 0.09
HIF3A-201ENST00000244302 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
HIF3A-201ENST00000244302 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
HIF3A-201ENST00000244302 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 PDE6BP35913 854 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 PALD1Q9ULE6 856 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 IRS2Q9Y4H2 1338 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 AK9Q5TCS8 1911 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 BBOX1O75936 387 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 NPR1P16066 1061 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 SPATA5Q8NB90 893 aa15.62■□□□□ 0.09
HIF3A-201ENST00000244302 UPF2Q9HAU5 1272 aaKnown RBP15.62■□□□□ 0.09
HIF3A-201ENST00000244302 PPEF1O14829 653 aaPredicted RBP15.61■□□□□ 0.09
HIF3A-201ENST00000244302 MASTLQ96GX5 879 aa15.61■□□□□ 0.09
HIF3A-201ENST00000244302 ANKRD2Q9GZV1 360 aa15.61■□□□□ 0.09
HIF3A-201ENST00000244302 LSG1Q9H089 658 aaKnown RBP15.61■□□□□ 0.09
HIF3A-201ENST00000244302 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
HIF3A-201ENST00000244302 COL11A2P13942 1736 aaPredicted RBP15.61■□□□□ 0.09
HIF3A-201ENST00000244302 FBXO33Q7Z6M2 555 aa15.61■□□□□ 0.09
HIF3A-201ENST00000244302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.61■□□□□ 0.09
HIF3A-201ENST00000244302 MYO5AQ9Y4I1 1855 aaKnown RBP15.6■□□□□ 0.09
HIF3A-201ENST00000244302 A0A1B0GUL6 1792 aa15.6■□□□□ 0.09
HIF3A-201ENST00000244302 H0YIN7 160 aa15.6■□□□□ 0.09
HIF3A-201ENST00000244302 IDH1O75874 414 aaKnown RBP15.6■□□□□ 0.09
HIF3A-201ENST00000244302 UFL1O94874 794 aa15.6■□□□□ 0.09
HIF3A-201ENST00000244302 RBM25P49756 843 aaKnown RBP15.6■□□□□ 0.09
HIF3A-201ENST00000244302 OSBP2Q969R2 916 aa15.6■□□□□ 0.09
HIF3A-201ENST00000244302 RIMBP2O15034 1052 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 COL9A3Q14050 684 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-201ENST00000244302 VPS53Q5VIR6 699 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 VPS37DQ86XT2 251 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 ZNF512BQ96KM6 892 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-201ENST00000244302 PPP1R1BQ9UD71 204 aaPredicted RBP15.59■□□□□ 0.09
HIF3A-201ENST00000244302 XDHP47989 1333 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 M0R2C6 588 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 KCNA3P22001 575 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
HIF3A-201ENST00000244302 PUS7LQ9H0K6 701 aaKnown RBP15.59■□□□□ 0.09
HIF3A-201ENST00000244302 ATP6V0A2Q9Y487 856 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 TAF6LQ9Y6J9 622 aa15.59■□□□□ 0.09
HIF3A-201ENST00000244302 C6orf229H3BNL8 230 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 UQCRFS1P1P0C7P4 283 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 DPEP1P16444 411 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 HIBADHP31937 336 aaKnown RBP15.58■□□□□ 0.08
HIF3A-201ENST00000244302 CHAF1AQ13111 956 aaPredicted RBP15.58■□□□□ 0.08
HIF3A-201ENST00000244302 SP8Q8IXZ3 490 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 RNF113AO15541 343 aaKnown RBP15.58■□□□□ 0.08
HIF3A-201ENST00000244302 REC8O95072 547 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 CD2BP2O95400 341 aaKnown RBP15.58■□□□□ 0.08
HIF3A-201ENST00000244302 GRIK5Q16478 980 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 CAVIN4Q5BKX8 364 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 SLC9C2Q5TAH2 1124 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 SLC16A10Q8TF71 515 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 ABCF2Q9UG63 623 aa15.58■□□□□ 0.08
HIF3A-201ENST00000244302 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
HIF3A-201ENST00000244302 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
HIF3A-201ENST00000244302 GGA1Q9UJY5 639 aa15.57■□□□□ 0.08
HIF3A-201ENST00000244302 SLX4Q8IY92 1834 aa15.56■□□□□ 0.08
HIF3A-201ENST00000244302 FRAT2O75474 233 aaPredicted RBP15.56■□□□□ 0.08
HIF3A-201ENST00000244302 ALDH1B1P30837 517 aa15.56■□□□□ 0.08
HIF3A-201ENST00000244302 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
HIF3A-201ENST00000244302 ZMYM1Q5SVZ6 1142 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms