RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 NAT10Q9H0A0 1025 aaKnown RBP18.12■□□□□ 0.49
DDX55-201ENST00000238146 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
DDX55-201ENST00000238146 SALL1Q9NSC2 1324 aa18.12■□□□□ 0.49
DDX55-201ENST00000238146 MYL6BP14649 208 aa18.12■□□□□ 0.49
DDX55-201ENST00000238146 AGXT2Q9BYV1 514 aa18.12■□□□□ 0.49
DDX55-201ENST00000238146 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
DDX55-201ENST00000238146 KIF2AO00139 706 aaPredicted RBP18.11■□□□□ 0.49
DDX55-201ENST00000238146 E4F1Q66K89 784 aaPredicted RBP18.11■□□□□ 0.49
DDX55-201ENST00000238146 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
DDX55-201ENST00000238146 METTL22Q9BUU2 404 aaPredicted RBP18.11■□□□□ 0.49
DDX55-201ENST00000238146 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
DDX55-201ENST00000238146 IMPACTQ9P2X3 320 aa18.11■□□□□ 0.49
DDX55-201ENST00000238146 COPS6Q7L5N1 327 aa18.1■□□□□ 0.49
DDX55-201ENST00000238146 KBTBD3Q8NAB2 608 aa18.1■□□□□ 0.49
DDX55-201ENST00000238146 MRPS27Q92552 414 aaKnown RBP18.1■□□□□ 0.49
DDX55-201ENST00000238146 SDF4Q9BRK5 362 aa18.1■□□□□ 0.49
DDX55-201ENST00000238146 SH3TC1Q8TE82 1336 aa18.1■□□□□ 0.49
DDX55-201ENST00000238146 TAF3Q5VWG9 929 aa18.1■□□□□ 0.49
DDX55-201ENST00000238146 A0A1B0GVL5 298 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 ADALQ6DHV7 355 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 SLC39A6Q13433 755 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 DPCR1Q3MIW9 517 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 ZNF446Q9NWS9 450 aa18.09■□□□□ 0.49
DDX55-201ENST00000238146 PDIA3P30101 505 aaKnown RBP18.08■□□□□ 0.49
DDX55-201ENST00000238146 ARMCX5Q6P1M9 558 aa18.08■□□□□ 0.49
DDX55-201ENST00000238146 PPP1R13BQ96KQ4 1090 aa18.08■□□□□ 0.49
DDX55-201ENST00000238146 XPO4Q9C0E2 1151 aaKnown RBP18.08■□□□□ 0.49
DDX55-201ENST00000238146 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.49
DDX55-201ENST00000238146 KIAA1468Q9P260 1216 aa18.08■□□□□ 0.49
DDX55-201ENST00000238146 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.49
DDX55-201ENST00000238146 NPHP1O15259 732 aa18.08■□□□□ 0.48
DDX55-201ENST00000238146 NDUFA8P51970 172 aa18.08■□□□□ 0.48
DDX55-201ENST00000238146 RABL6Q3YEC7 729 aaPredicted RBP18.08■□□□□ 0.48
DDX55-201ENST00000238146 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
DDX55-201ENST00000238146 FDPSP14324 419 aaKnown RBP18.07■□□□□ 0.48
DDX55-201ENST00000238146 PSME1Q06323 249 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 A0A1W2PQ27 194 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 A0A1W2PQ64 194 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 A0A1W2PQD8 194 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 E7EWF7 191 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 TMC6Q7Z403 805 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 ZNF274Q96GC6 653 aaPredicted RBP18.07■□□□□ 0.48
DDX55-201ENST00000238146 IFNKQ9P0W0 207 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 CCDC9Q9Y3X0 531 aaKnown RBP18.07■□□□□ 0.48
DDX55-201ENST00000238146 NEDD4P46934 1319 aa18.07■□□□□ 0.48
DDX55-201ENST00000238146 ERCC6LQ2NKX8 1250 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 ANKRD13DQ6ZTN6 518 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 UBE3BQ7Z3V4 1068 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 CCDC150Q8NCX0 1101 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
DDX55-201ENST00000238146 BPIFA3Q9BQP9 254 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 SIPA1L3O60292 1781 aaPredicted RBP18.06■□□□□ 0.48
DDX55-201ENST00000238146 PSDA5PKW4 1024 aaPredicted RBP18.06■□□□□ 0.48
DDX55-201ENST00000238146 SMC2O95347 1197 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 H2AFXP16104 143 aaPredicted RBP18.06■□□□□ 0.48
DDX55-201ENST00000238146 CCDC93Q567U6 631 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 SYT10Q6XYQ8 523 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 LRRN4CLQ8ND94 238 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 HELLSQ9NRZ9 838 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 ABCC6O95255 1503 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 PODXL2Q9NZ53 605 aa18.06■□□□□ 0.48
DDX55-201ENST00000238146 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
DDX55-201ENST00000238146 GOLIM4O00461 696 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 GCP02774 474 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 SFPQP23246 707 aaKnown RBP eCLIP18.05■□□□□ 0.48
DDX55-201ENST00000238146 ST7Q9NRC1 585 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 HSPD1P10809 573 aaKnown RBP18.05■□□□□ 0.48
DDX55-201ENST00000238146 KCNJ6P48051 423 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 OTUD7BQ6GQQ9 843 aa18.05■□□□□ 0.48
DDX55-201ENST00000238146 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
DDX55-201ENST00000238146 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
DDX55-201ENST00000238146 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
DDX55-201ENST00000238146 PAG1Q9NWQ8 432 aa18.04■□□□□ 0.48
DDX55-201ENST00000238146 NCAPHQ15003 741 aa18.04■□□□□ 0.48
DDX55-201ENST00000238146 STK38Q15208 465 aa18.04■□□□□ 0.48
DDX55-201ENST00000238146 SF3A1Q15459 793 aaKnown RBP18.04■□□□□ 0.48
DDX55-201ENST00000238146 BIN1O00499 593 aa18.03■□□□□ 0.48
DDX55-201ENST00000238146 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
DDX55-201ENST00000238146 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
DDX55-201ENST00000238146 RBM33Q96EV2 1170 aaKnown RBP18.03■□□□□ 0.48
DDX55-201ENST00000238146 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
DDX55-201ENST00000238146 POLR3DP05423 398 aaPredicted RBP18.03■□□□□ 0.48
DDX55-201ENST00000238146 KCNG4Q8TDN1 519 aa18.03■□□□□ 0.48
DDX55-201ENST00000238146 SLC3A2P08195 630 aaKnown RBP18.02■□□□□ 0.48
DDX55-201ENST00000238146 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
DDX55-201ENST00000238146 AXIN2Q9Y2T1 843 aa18.02■□□□□ 0.48
DDX55-201ENST00000238146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.02■□□□□ 0.487e-7■■□□□ 14.1
DDX55-201ENST00000238146 A0A087WZG4 1122 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms