RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 ZNF213O14771 459 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 KIF1CO43896 1103 aaKnown RBP13.22□□□□□ -0.29
PCDH12-201ENST00000231484 ZKSCAN8Q15776 578 aaPredicted RBP13.22□□□□□ -0.29
PCDH12-201ENST00000231484 SMARCC2Q8TAQ2 1214 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 RAB3IPQ96QF0 476 aaPredicted RBP13.22□□□□□ -0.29
PCDH12-201ENST00000231484 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 EXOC1Q9NV70 894 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 AFMP43652 599 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 FYB2Q5VWT5 728 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 UBXN1Q04323 297 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 E2F4Q16254 413 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 PLEKHO1Q53GL0 409 aaPredicted RBP13.22□□□□□ -0.29
PCDH12-201ENST00000231484 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 SPTLC2O15270 562 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 TXNDC2Q86VQ3 553 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 MRFAP1L1Q96HT8 127 aa13.22□□□□□ -0.29
PCDH12-201ENST00000231484 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
PCDH12-201ENST00000231484 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 ARHGAP24Q8N264 748 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 N4BP2L2Q92802 583 aaPredicted RBP13.21□□□□□ -0.29
PCDH12-201ENST00000231484 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 CCDC26Q8TAB7 109 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 BCAS4Q8TDM0 211 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 ARHGAP6O43182 974 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 HIP1RO75146 1068 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 CETN1Q12798 172 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 RAD54L2Q9Y4B4 1467 aa13.21□□□□□ -0.29
PCDH12-201ENST00000231484 A0A087WZG4 1122 aa13.21□□□□□ -0.3
PCDH12-201ENST00000231484 ATP2A1O14983 1001 aa13.21□□□□□ -0.3
PCDH12-201ENST00000231484 NLRP5P59047 1200 aa13.21□□□□□ -0.3
PCDH12-201ENST00000231484 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.3
PCDH12-201ENST00000231484 TPD52P55327 224 aaPredicted RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 SF3B2Q13435 895 aaKnown RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 GKAP1Q5VSY0 366 aaPredicted RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 HNRNPH2P55795 449 aaKnown RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 CROCCP2Q86T23 111 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 HOMEZQ8IX15 550 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC194A0A1B0GVG4 234 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 AK2P54819 239 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 PPP1R7Q15435 360 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 TCERG1LQ5VWI1 586 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 CYP26C1Q6V0L0 522 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 METAP2P50579 478 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 TRIM14Q14142 442 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 NUTM2AQ8IVF1 878 aaPredicted RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 JPH2Q9BR39 696 aaPredicted RBP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 USP26Q9BXU7 913 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 BMP15O95972 392 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDH12-201ENST00000231484 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 STK38LQ9Y2H1 464 aa13.2□□□□□ -0.3
PCDH12-201ENST00000231484 PSMA7O14818 248 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
PCDH12-201ENST00000231484 RPSAP08865 295 aaKnown RBP13.19□□□□□ -0.3
PCDH12-201ENST00000231484 CABP4P57796 275 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 SPAG5Q96R06 1193 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 USH1CQ9Y6N9 552 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
PCDH12-201ENST00000231484 ZNF131P52739 623 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 PAK2Q13177 524 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 BRF1Q92994 677 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 CFTRP13569 1480 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 PRC1O43663 620 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 CCT5P48643 541 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
PCDH12-201ENST00000231484 MAP7D1Q3KQU3 841 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 TAOK1Q7L7X3 1001 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
PCDH12-201ENST00000231484 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 PDE1AP54750 535 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 FANCCQ00597 558 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
PCDH12-201ENST00000231484 ZNF76P36508 570 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
PCDH12-201ENST00000231484 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
PCDH12-201ENST00000231484 UBA7P41226 1012 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 MIER3Q7Z3K6 550 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
PCDH12-201ENST00000231484 MAGEA9P43362 315 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 TERF2Q15554 542 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 MMS22LQ6ZRQ5 1243 aa13.18□□□□□ -0.3
PCDH12-201ENST00000231484 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms