RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 AFDNP55196 1824 aaKnown RBP24.42■■□□□ 1.5
SNX3-201ENST00000230085 SYT1P21579 422 aa24.42■■□□□ 1.5
SNX3-201ENST00000230085 CNTROBQ8N137 903 aa24.42■■□□□ 1.5
SNX3-201ENST00000230085 CCDC24Q8N4L8 307 aa24.42■■□□□ 1.5
SNX3-201ENST00000230085 CCDC191Q8NCU4 936 aa24.42■■□□□ 1.5
SNX3-201ENST00000230085 GOLGB1Q14789 3259 aaKnown RBP24.41■■□□□ 1.5
SNX3-201ENST00000230085 UTP14CQ5TAP6 766 aaKnown RBP24.41■■□□□ 1.5
SNX3-201ENST00000230085 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
SNX3-201ENST00000230085 IL25Q9H293 177 aa24.41■■□□□ 1.5
SNX3-201ENST00000230085 VPS53Q5VIR6 699 aa24.4■■□□□ 1.5
SNX3-201ENST00000230085 TPTE2Q6XPS3 522 aa24.4■■□□□ 1.5
SNX3-201ENST00000230085 PPP1R42Q7Z4L9 355 aa24.4■■□□□ 1.5
SNX3-201ENST00000230085 CWC25Q9NXE8 425 aaPredicted RBP24.4■■□□□ 1.5
SNX3-201ENST00000230085 NPHP1O15259 732 aa24.39■■□□□ 1.5
SNX3-201ENST00000230085 NTSR2O95665 410 aa24.39■■□□□ 1.5
SNX3-201ENST00000230085 PRR5LQ6MZQ0 368 aa24.39■■□□□ 1.5
SNX3-201ENST00000230085 RUFY3Q7L099 469 aa24.39■■□□□ 1.5
SNX3-201ENST00000230085 SYNE4Q8N205 404 aa24.39■■□□□ 1.5
SNX3-201ENST00000230085 RHPN1Q8TCX5 695 aa24.39■■□□□ 1.5
SNX3-201ENST00000230085 UTP14AQ9BVJ6 771 aaKnown RBP24.39■■□□□ 1.5
SNX3-201ENST00000230085 TRMT112Q9UI30 125 aaKnown RBP24.39■■□□□ 1.5
SNX3-201ENST00000230085 AK2P54819 239 aa24.39■■□□□ 1.49
SNX3-201ENST00000230085 CNBD1Q8NA66 436 aa24.39■■□□□ 1.49
SNX3-201ENST00000230085 CNPY2Q9Y2B0 182 aa24.39■■□□□ 1.49
SNX3-201ENST00000230085 ELP1O95163 1332 aa24.39■■□□□ 1.49
SNX3-201ENST00000230085 MTX1Q13505 466 aa24.38■■□□□ 1.49
SNX3-201ENST00000230085 GCKRQ14397 625 aa24.38■■□□□ 1.49
SNX3-201ENST00000230085 JARID2Q92833 1246 aaPredicted RBP24.38■■□□□ 1.49
SNX3-201ENST00000230085 FAM89AQ96GI7 184 aa24.38■■□□□ 1.49
SNX3-201ENST00000230085 NYXQ9GZU5 481 aa24.38■■□□□ 1.49
SNX3-201ENST00000230085 NRXN2Q9P2S2 1712 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 GTF2E1P29083 439 aaPredicted RBP24.37■■□□□ 1.49
SNX3-201ENST00000230085 KIAA1524Q8TCG1 905 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 GDPD2Q9HCC8 539 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 SMC3Q9UQE7 1217 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 ERFEQ4G0M1 354 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 RUFY2Q8WXA3 655 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 SNRKQ9NRH2 765 aa24.37■■□□□ 1.49
SNX3-201ENST00000230085 HCLS1P14317 486 aaPredicted RBP24.36■■□□□ 1.49
SNX3-201ENST00000230085 ZSWIM6Q9HCJ5 1215 aa24.36■■□□□ 1.49
SNX3-201ENST00000230085 MTMR6Q9Y217 621 aa24.36■■□□□ 1.49
SNX3-201ENST00000230085 ALDH1L1O75891 902 aa24.35■■□□□ 1.49
SNX3-201ENST00000230085 GLRX3O76003 335 aaKnown RBP24.35■■□□□ 1.49
SNX3-201ENST00000230085 ZBTB38Q8NAP3 1195 aaPredicted RBP24.35■■□□□ 1.49
SNX3-201ENST00000230085 PPP1R1BQ9UD71 204 aaPredicted RBP24.35■■□□□ 1.49
SNX3-201ENST00000230085 ALDH8A1Q9H2A2 487 aaPredicted RBP24.34■■□□□ 1.49
SNX3-201ENST00000230085 DIAPH3Q9NSV4 1193 aa24.34■■□□□ 1.49
SNX3-201ENST00000230085 KIF3AQ9Y496 699 aa24.34■■□□□ 1.49
SNX3-201ENST00000230085 SH3TC1Q8TE82 1336 aa24.34■■□□□ 1.49
SNX3-201ENST00000230085 RASEFQ8IZ41 740 aa24.34■■□□□ 1.49
SNX3-201ENST00000230085 ZNF710Q8N1W2 664 aa24.34■■□□□ 1.49
SNX3-201ENST00000230085 GOLGA6L6A8MZA4 724 aa24.33■■□□□ 1.49
SNX3-201ENST00000230085 ST5P78524 1137 aa24.33■■□□□ 1.49
SNX3-201ENST00000230085 ABCC12Q96J65 1359 aa24.32■■□□□ 1.48
SNX3-201ENST00000230085 PCCAP05165 728 aaPredicted RBP24.32■■□□□ 1.48
SNX3-201ENST00000230085 UBE3BQ7Z3V4 1068 aa24.32■■□□□ 1.48
SNX3-201ENST00000230085 H7C1W4 665 aa24.31■■□□□ 1.48
SNX3-201ENST00000230085 SURF6O75683 361 aaKnown RBP24.31■■□□□ 1.48
SNX3-201ENST00000230085 SYCP1Q15431 976 aa24.31■■□□□ 1.48
SNX3-201ENST00000230085 NOL8Q76FK4 1167 aaKnown RBP24.31■■□□□ 1.48
SNX3-201ENST00000230085 C9orf78Q9NZ63 289 aaPredicted RBP24.31■■□□□ 1.48
SNX3-201ENST00000230085 GRM8O00222 908 aa24.31■■□□□ 1.48
SNX3-201ENST00000230085 CCDC192P0DO97 292 aa24.31■■□□□ 1.48
SNX3-201ENST00000230085 CTIFO43310 598 aaKnown RBP24.3■■□□□ 1.48
SNX3-201ENST00000230085 NBPF7P0C2Y1 421 aaPredicted RBP24.3■■□□□ 1.48
SNX3-201ENST00000230085 DNTTIP2Q5QJE6 756 aaKnown RBP24.3■■□□□ 1.48
SNX3-201ENST00000230085 C10orf71Q711Q0 1435 aa24.3■■□□□ 1.48
SNX3-201ENST00000230085 FHDC1Q9C0D6 1143 aaPredicted RBP24.3■■□□□ 1.48
SNX3-201ENST00000230085 TTC12Q9H892 705 aaPredicted RBP24.3■■□□□ 1.48
SNX3-201ENST00000230085 IL1RAPL2Q9NP60 686 aa24.3■■□□□ 1.48
SNX3-201ENST00000230085 IRS4O14654 1257 aaPredicted RBP24.29■■□□□ 1.48
SNX3-201ENST00000230085 CASP7P55210 303 aa24.29■■□□□ 1.48
SNX3-201ENST00000230085 RBM43Q6ZSC3 357 aaKnown RBP24.29■■□□□ 1.48
SNX3-201ENST00000230085 BRIP1Q9BX63 1249 aa24.29■■□□□ 1.48
SNX3-201ENST00000230085 SLC10A5Q5PT55 438 aa24.29■■□□□ 1.48
SNX3-201ENST00000230085 FAM200AQ8TCP9 573 aa24.29■■□□□ 1.48
SNX3-201ENST00000230085 ANKRD31Q8N7Z5 1873 aa24.29■■□□□ 1.48
SNX3-201ENST00000230085 LRP5O75197 1615 aa24.29■■□□□ 1.48
SNX3-201ENST00000230085 DMTNQ08495 405 aa24.28■■□□□ 1.48
SNX3-201ENST00000230085 ANKRD7Q92527 254 aa24.28■■□□□ 1.48
SNX3-201ENST00000230085 HDAC5Q9UQL6 1122 aa24.28■■□□□ 1.48
SNX3-201ENST00000230085 UTRNP46939 3433 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 PDCP20941 246 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 NECTIN1Q15223 517 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 C3orf67Q6ZVT6 689 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 CD2APQ9Y5K6 639 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 CYP46A1Q9Y6A2 500 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 KIF13BQ9NQT8 1826 aa24.27■■□□□ 1.48
SNX3-201ENST00000230085 HIP1O00291 1037 aa24.26■■□□□ 1.47
SNX3-201ENST00000230085 GJB2P29033 226 aa24.26■■□□□ 1.47
SNX3-201ENST00000230085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.26■■□□□ 1.47
SNX3-201ENST00000230085 KCNF1Q9H3M0 494 aa24.26■■□□□ 1.47
SNX3-201ENST00000230085 SRGAP3O43295 1099 aa24.26■■□□□ 1.47
SNX3-201ENST00000230085 ERC1Q8IUD2 1116 aa24.26■■□□□ 1.47
SNX3-201ENST00000230085 GTPBP4Q9BZE4 634 aaKnown RBP24.26■■□□□ 1.47
SNX3-201ENST00000230085 PDRG1Q9NUG6 133 aa24.26■■□□□ 1.47
SNX3-201ENST00000230085 UTYO14607 1347 aa24.25■■□□□ 1.47
SNX3-201ENST00000230085 CDHR2Q9BYE9 1310 aa24.25■■□□□ 1.47
SNX3-201ENST00000230085 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
SNX3-201ENST00000230085 FIBPO43427 364 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms