RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 TRAPPC3LQ5T215 181 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 LRRC2Q9BYS8 371 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 MROH2AA6NES4 1674 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 RAD50Q92878 1312 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 CAVIN4Q5BKX8 364 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 A1BGP04217 495 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 PTH1RQ03431 593 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 TMC6Q7Z403 805 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
CCND1-201ENST00000227507 PPLO60437 1756 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
CCND1-201ENST00000227507 PSMA5P28066 241 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 RXRBP28702 533 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 CCDC171Q6TFL3 1326 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
CCND1-201ENST00000227507 NYXQ9GZU5 481 aa13.37□□□□□ -0.27
CCND1-201ENST00000227507 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
CCND1-201ENST00000227507 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 AXIN2Q9Y2T1 843 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 ERICH2A1L162 156 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 APBA3O96018 575 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.273e-9■□□□□ 10.7
CCND1-201ENST00000227507 TPM4P67936 248 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 RBM8AQ9Y5S9 174 aaKnown RBP13.36□□□□□ -0.27
CCND1-201ENST00000227507 LRRC8AQ8IWT6 810 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 CEP57L1Q8IYX8 460 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 PDILTQ8N807 584 aa13.36□□□□□ -0.27
CCND1-201ENST00000227507 CCDC8Q9H0W5 538 aaPredicted RBP13.36□□□□□ -0.27
CCND1-201ENST00000227507 RPAP1Q9BWH6 1393 aaPredicted RBP13.36□□□□□ -0.27
CCND1-201ENST00000227507 SLC5A1P13866 664 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 BAG6P46379 1132 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 CWF19L2Q2TBE0 894 aaKnown RBP13.35□□□□□ -0.27
CCND1-201ENST00000227507 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 RAD21O60216 631 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 CCAR1Q8IX12 1150 aaKnown RBP13.35□□□□□ -0.27
CCND1-201ENST00000227507 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 PLBD2Q8NHP8 589 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 LEO1Q8WVC0 666 aaPredicted RBP13.35□□□□□ -0.27
CCND1-201ENST00000227507 ABCF2Q9UG63 623 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 AFF2P51816 1311 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 TPCN1Q9ULQ1 816 aa13.35□□□□□ -0.27
CCND1-201ENST00000227507 MYOM1P52179 1685 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 MED14O60244 1454 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
CCND1-201ENST00000227507 HNRNPH2P55795 449 aaKnown RBP13.34□□□□□ -0.27
CCND1-201ENST00000227507 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
CCND1-201ENST00000227507 IDH1O75874 414 aaKnown RBP13.34□□□□□ -0.27
CCND1-201ENST00000227507 BRF1Q92994 677 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 ZNF622Q969S3 477 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCND1-201ENST00000227507 DCCP43146 1447 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 CPLX1O14810 134 aa13.34□□□□□ -0.27
CCND1-201ENST00000227507 PA2G4Q9UQ80 394 aaKnown RBP13.34□□□□□ -0.27
CCND1-201ENST00000227507 MORC2Q9Y6X9 1032 aaPredicted RBP13.34□□□□□ -0.27
CCND1-201ENST00000227507 KCNQ3O43525 872 aa13.33□□□□□ -0.27
CCND1-201ENST00000227507 JAK2O60674 1132 aa13.33□□□□□ -0.27
CCND1-201ENST00000227507 LMAN1P49257 510 aa13.33□□□□□ -0.27
CCND1-201ENST00000227507 HSP90AA4PQ58FG1 418 aa13.33□□□□□ -0.27
CCND1-201ENST00000227507 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.27
CCND1-201ENST00000227507 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
CCND1-201ENST00000227507 CLSTN2Q9H4D0 955 aa13.33□□□□□ -0.28
CCND1-201ENST00000227507 VPS53Q5VIR6 699 aa13.33□□□□□ -0.28
CCND1-201ENST00000227507 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
CCND1-201ENST00000227507 FSIP1Q8NA03 581 aa13.33□□□□□ -0.28
CCND1-201ENST00000227507 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
CCND1-201ENST00000227507 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
CCND1-201ENST00000227507 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 STX1AQ16623 288 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 PARP10Q53GL7 1025 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 KRT27Q7Z3Y8 459 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 FAM227BQ96M60 508 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 FUCA2Q9BTY2 467 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 SLC3A2P08195 630 aaKnown RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 HSPA1LP34931 641 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 C11orf57Q6ZUT1 292 aaPredicted RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms