RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 USP17L4A6NCW7 530 aa22.81■■□□□ 1.24
PFN1-201ENST00000225655 USP17L1Q7RTZ2 530 aa22.81■■□□□ 1.24
PFN1-201ENST00000225655 DCPSQ96C86 337 aaKnown RBP22.81■■□□□ 1.24
PFN1-201ENST00000225655 GMLQ99445 158 aa22.81■■□□□ 1.24
PFN1-201ENST00000225655 ANKRD2Q9GZV1 360 aa22.81■■□□□ 1.24
PFN1-201ENST00000225655 LEMD3Q9Y2U8 911 aa22.81■■□□□ 1.24
PFN1-201ENST00000225655 CT47B1P0C2W7 299 aaPredicted RBP22.8■■□□□ 1.24
PFN1-201ENST00000225655 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
PFN1-201ENST00000225655 MPHOSPH8Q99549 860 aa22.8■■□□□ 1.24
PFN1-201ENST00000225655 ZNF646O15015 1829 aaPredicted RBP22.8■■□□□ 1.24
PFN1-201ENST00000225655 MAP2K2P36507 400 aa22.79■■□□□ 1.24
PFN1-201ENST00000225655 FOXO4P98177 505 aa22.79■■□□□ 1.24
PFN1-201ENST00000225655 GRM1Q13255 1194 aa22.79■■□□□ 1.24
PFN1-201ENST00000225655 ANKRD18BA2A2Z9 1011 aa22.78■■□□□ 1.24
PFN1-201ENST00000225655 USP17L8P0C7I0 530 aa22.78■■□□□ 1.24
PFN1-201ENST00000225655 COA1Q9GZY4 146 aa22.78■■□□□ 1.24
PFN1-201ENST00000225655 ZNF804BA4D1E1 1349 aa22.78■■□□□ 1.24
PFN1-201ENST00000225655 DLK2Q6UY11 383 aa22.77■■□□□ 1.24
PFN1-201ENST00000225655 TXNRD3Q86VQ6 643 aa22.77■■□□□ 1.24
PFN1-201ENST00000225655 GGA3Q9NZ52 723 aa22.77■■□□□ 1.24
PFN1-201ENST00000225655 ADM5C9JUS6 153 aa22.76■■□□□ 1.23
PFN1-201ENST00000225655 GRM8O00222 908 aa22.76■■□□□ 1.23
PFN1-201ENST00000225655 LBX1P52954 281 aa22.76■■□□□ 1.23
PFN1-201ENST00000225655 IFIT5Q13325 482 aaKnown RBP22.76■■□□□ 1.23
PFN1-201ENST00000225655 SULF1Q8IWU6 871 aa22.76■■□□□ 1.23
PFN1-201ENST00000225655 MYOZ2Q9NPC6 264 aa22.76■■□□□ 1.23
PFN1-201ENST00000225655 ALDH1L1O75891 902 aa22.75■■□□□ 1.23
PFN1-201ENST00000225655 HSPA8P11142 646 aaKnown RBP22.75■■□□□ 1.23
PFN1-201ENST00000225655 CHRNDQ07001 517 aa22.75■■□□□ 1.23
PFN1-201ENST00000225655 DACT2Q5SW24 774 aa22.75■■□□□ 1.23
PFN1-201ENST00000225655 STRIP1Q5VSL9 837 aa22.75■■□□□ 1.23
PFN1-201ENST00000225655 BEGAINQ9BUH8 593 aa22.75■■□□□ 1.23
PFN1-201ENST00000225655 A0A1B0GUL6 1792 aa22.75■■□□□ 1.23
PFN1-201ENST00000225655 ASTN2O75129 1339 aaPredicted RBP22.75■■□□□ 1.23
PFN1-201ENST00000225655 AOC2O75106 756 aa22.74■■□□□ 1.23
PFN1-201ENST00000225655 SCARF1Q14162 830 aa22.74■■□□□ 1.23
PFN1-201ENST00000225655 MYO3BQ8WXR4 1341 aa22.74■■□□□ 1.23
PFN1-201ENST00000225655 KLRK1P26718 216 aa22.73■■□□□ 1.23
PFN1-201ENST00000225655 KCNJ4P48050 445 aa22.73■■□□□ 1.23
PFN1-201ENST00000225655 HUNKP57058 714 aa22.73■■□□□ 1.23
PFN1-201ENST00000225655 LMBR1LQ6UX01 489 aa22.73■■□□□ 1.23
PFN1-201ENST00000225655 SRCIN1Q9C0H9 1055 aa22.73■■□□□ 1.23
PFN1-201ENST00000225655 GBA2Q9HCG7 927 aaPredicted RBP22.73■■□□□ 1.23
PFN1-201ENST00000225655 C9orf78Q9NZ63 289 aaPredicted RBP22.73■■□□□ 1.23
PFN1-201ENST00000225655 CHMP3Q9Y3E7 222 aa22.73■■□□□ 1.23
PFN1-201ENST00000225655 EPHA10Q5JZY3 1008 aa22.72■■□□□ 1.23
PFN1-201ENST00000225655 ANGEL2Q5VTE6 544 aaKnown RBP22.72■■□□□ 1.23
PFN1-201ENST00000225655 SLC4A10Q6U841 1118 aa22.72■■□□□ 1.23
PFN1-201ENST00000225655 C2orf69Q8N8R5 385 aa22.72■■□□□ 1.23
PFN1-201ENST00000225655 PITPNM2Q9BZ72 1349 aa22.72■■□□□ 1.23
PFN1-201ENST00000225655 MMP14P50281 582 aa22.71■■□□□ 1.23
PFN1-201ENST00000225655 BRPF1P55201 1214 aaPredicted RBP22.71■■□□□ 1.23
PFN1-201ENST00000225655 CCDC57Q2TAC2 916 aa22.71■■□□□ 1.23
PFN1-201ENST00000225655 C15orf52Q6ZUT6 534 aaKnown RBP22.71■■□□□ 1.23
PFN1-201ENST00000225655 OGFOD1Q8N543 542 aa22.71■■□□□ 1.23
PFN1-201ENST00000225655 CDCA5Q96FF9 252 aa22.71■■□□□ 1.23
PFN1-201ENST00000225655 MXD3Q9BW11 206 aa22.71■■□□□ 1.23
PFN1-201ENST00000225655 CAPN15O75808 1086 aa22.7■■□□□ 1.22
PFN1-201ENST00000225655 NOGQ13253 232 aa22.7■■□□□ 1.22
PFN1-201ENST00000225655 TTLL5Q6EMB2 1281 aa22.7■■□□□ 1.22
PFN1-201ENST00000225655 FBXW7Q969H0 707 aa22.7■■□□□ 1.22
PFN1-201ENST00000225655 IRS2Q9Y4H2 1338 aa22.7■■□□□ 1.22
PFN1-201ENST00000225655 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
PFN1-201ENST00000225655 RGMBQ6NW40 437 aa22.69■■□□□ 1.22
PFN1-201ENST00000225655 MRPL50Q8N5N7 158 aaKnown RBP22.69■■□□□ 1.22
PFN1-201ENST00000225655 CA12O43570 354 aa22.68■■□□□ 1.22
PFN1-201ENST00000225655 TAF5LO75529 589 aa22.68■■□□□ 1.22
PFN1-201ENST00000225655 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
PFN1-201ENST00000225655 UTYO14607 1347 aa22.67■■□□□ 1.22
PFN1-201ENST00000225655 TAF7LQ5H9L4 462 aa22.67■■□□□ 1.22
PFN1-201ENST00000225655 LDHAL6AQ6ZMR3 332 aa22.67■■□□□ 1.22
PFN1-201ENST00000225655 CD209Q9NNX6 404 aa22.67■■□□□ 1.22
PFN1-201ENST00000225655 PTPRCP08575 1304 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 FAM155AB1AL88 458 aaPredicted RBP22.66■■□□□ 1.22
PFN1-201ENST00000225655 SNAP23O00161 211 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 GTF2IP78347 998 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 NBPF9Q3BBW0 867 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 CCDC102AQ96A19 550 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 KAZALD1Q96I82 304 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 ZNF594Q96JF6 807 aaPredicted RBP22.66■■□□□ 1.22
PFN1-201ENST00000225655 SMC4Q9NTJ3 1288 aa22.66■■□□□ 1.22
PFN1-201ENST00000225655 WNT10BO00744 389 aa22.65■■□□□ 1.22
PFN1-201ENST00000225655 NBPF7P0C2Y1 421 aaPredicted RBP22.65■■□□□ 1.22
PFN1-201ENST00000225655 FKBP1BP68106 108 aa22.65■■□□□ 1.22
PFN1-201ENST00000225655 SUCLG2Q96I99 432 aa22.65■■□□□ 1.22
PFN1-201ENST00000225655 CNNM1Q9NRU3 951 aa22.65■■□□□ 1.22
PFN1-201ENST00000225655 PAPPA2Q9BXP8 1791 aa22.65■■□□□ 1.22
PFN1-201ENST00000225655 IL1R1P14778 569 aa22.64■■□□□ 1.21
PFN1-201ENST00000225655 ZNF157P51786 506 aaPredicted RBP22.64■■□□□ 1.21
PFN1-201ENST00000225655 ZNF804AQ7Z570 1209 aa22.64■■□□□ 1.21
PFN1-201ENST00000225655 KIAA0825Q8IV33 1275 aa22.64■■□□□ 1.21
PFN1-201ENST00000225655 SSH1Q8WYL5 1049 aa22.64■■□□□ 1.21
PFN1-201ENST00000225655 ZIC5Q96T25 663 aa22.64■■□□□ 1.21
PFN1-201ENST00000225655 HDAC9Q9UKV0 1011 aa22.64■■□□□ 1.21
PFN1-201ENST00000225655 SASH1O94885 1247 aa22.62■■□□□ 1.21
PFN1-201ENST00000225655 TSKSQ9UJT2 592 aa22.62■■□□□ 1.21
PFN1-201ENST00000225655 PLIN1O60240 522 aa22.61■■□□□ 1.21
PFN1-201ENST00000225655 SLC10A3P09131 477 aa22.61■■□□□ 1.21
PFN1-201ENST00000225655 RARSP54136 660 aaKnown RBP22.61■■□□□ 1.21
PFN1-201ENST00000225655 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms