RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
SUPT4H1-201ENST00000225504 DCAF8Q5TAQ9 597 aa17.9■□□□□ 0.46
SUPT4H1-201ENST00000225504 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
SUPT4H1-201ENST00000225504 FGFR2P21802 821 aa17.89■□□□□ 0.45
SUPT4H1-201ENST00000225504 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
SUPT4H1-201ENST00000225504 C15orf52Q6ZUT6 534 aaKnown RBP17.89■□□□□ 0.45
SUPT4H1-201ENST00000225504 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
SUPT4H1-201ENST00000225504 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
SUPT4H1-201ENST00000225504 SCN9AQ15858 1988 aa17.89■□□□□ 0.45
SUPT4H1-201ENST00000225504 SURF6O75683 361 aaKnown RBP17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 GYG1P46976 350 aa17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 TFCP2Q12800 502 aa17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 CIAPIN1Q6FI81 312 aa17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 RPAP2Q8IXW5 612 aaPredicted RBP17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 GPC2Q8N158 579 aa17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 SASH1O94885 1247 aa17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 COA1Q9GZY4 146 aa17.88■□□□□ 0.45
SUPT4H1-201ENST00000225504 PSMD14O00487 310 aa17.87■□□□□ 0.45
SUPT4H1-201ENST00000225504 KIF3CO14782 793 aa17.87■□□□□ 0.45
SUPT4H1-201ENST00000225504 G3BP1Q13283 466 aaKnown RBP eCLIP17.87■□□□□ 0.45
SUPT4H1-201ENST00000225504 CD209Q9NNX6 404 aa17.87■□□□□ 0.45
SUPT4H1-201ENST00000225504 NOP58Q9Y2X3 529 aaKnown RBP17.87■□□□□ 0.45
SUPT4H1-201ENST00000225504 ZBTB12Q9Y330 459 aaPredicted RBP17.87■□□□□ 0.45
SUPT4H1-201ENST00000225504 TIMM10P62072 90 aa17.86■□□□□ 0.45
SUPT4H1-201ENST00000225504 TNIP1Q15025 636 aa17.86■□□□□ 0.45
SUPT4H1-201ENST00000225504 PUM3Q15397 648 aaKnown RBP17.86■□□□□ 0.45
SUPT4H1-201ENST00000225504 PODNQ7Z5L7 613 aa17.86■□□□□ 0.45
SUPT4H1-201ENST00000225504 MXD3Q9BW11 206 aa17.86■□□□□ 0.45
SUPT4H1-201ENST00000225504 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
SUPT4H1-201ENST00000225504 GMPSP49915 693 aaPredicted RBP17.85■□□□□ 0.45
SUPT4H1-201ENST00000225504 BCAMP50895 628 aa17.85■□□□□ 0.45
SUPT4H1-201ENST00000225504 IRX6P78412 446 aaPredicted RBP17.85■□□□□ 0.45
SUPT4H1-201ENST00000225504 FBXO33Q7Z6M2 555 aa17.85■□□□□ 0.45
SUPT4H1-201ENST00000225504 L3MBTL3Q96JM7 780 aaPredicted RBP17.85■□□□□ 0.45
SUPT4H1-201ENST00000225504 EXOC6BQ9Y2D4 811 aa17.85■□□□□ 0.45
SUPT4H1-201ENST00000225504 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 VIL1P09327 827 aaKnown RBP17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 HIBADHP31937 336 aaKnown RBP17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 SCNN1DP51172 638 aa17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 ATP2B3Q16720 1220 aa17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 EXOC6Q8TAG9 804 aa17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 LPIN2Q92539 896 aa17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
SUPT4H1-201ENST00000225504 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.45
SUPT4H1-201ENST00000225504 IL1R1P14778 569 aa17.83■□□□□ 0.45
SUPT4H1-201ENST00000225504 ADORA1P30542 326 aa17.83■□□□□ 0.45
SUPT4H1-201ENST00000225504 EPS15P42566 896 aa17.83■□□□□ 0.45
SUPT4H1-201ENST00000225504 ZNF804AQ7Z570 1209 aa17.83■□□□□ 0.45
SUPT4H1-201ENST00000225504 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.45
SUPT4H1-201ENST00000225504 USP17L3A6NCW0 530 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 USP17L4A6NCW7 530 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 SLC5A1P13866 664 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 GTF2IP78347 998 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 USP17L1Q7RTZ2 530 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 TDRD7Q8NHU6 1098 aaKnown RBP17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 FBXW7Q969H0 707 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 JAG2Q9Y219 1238 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 A0A1B0GUL7 405 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 DACT2Q5SW24 774 aa17.82■□□□□ 0.44
SUPT4H1-201ENST00000225504 CAVIN4Q5BKX8 364 aa17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 RSBN1LQ6PCB5 846 aaPredicted RBP17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 NEUROD6Q96NK8 337 aa17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 GMLQ99445 158 aa17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 TAF1DQ9H5J8 278 aaPredicted RBP17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 GPRC5DQ9NZD1 345 aa17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 CNOT7Q9UIV1 285 aaKnown RBP17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 HACL1Q9UJ83 578 aa17.81■□□□□ 0.44
SUPT4H1-201ENST00000225504 APBB1O00213 710 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 HMMRO75330 724 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 STRIP1Q5VSL9 837 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 XAGE2Q96GT9 111 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 AKAP2Q9Y2D5 859 aa17.8■□□□□ 0.44
SUPT4H1-201ENST00000225504 ZNF646O15015 1829 aaPredicted RBP17.79■□□□□ 0.44
SUPT4H1-201ENST00000225504 PHKA1P46020 1223 aa17.79■□□□□ 0.44
SUPT4H1-201ENST00000225504 VPS37DQ86XT2 251 aa17.79■□□□□ 0.44
SUPT4H1-201ENST00000225504 CERS5Q8N5B7 392 aa17.79■□□□□ 0.44
SUPT4H1-201ENST00000225504 PSME4Q14997 1843 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 IQCA1LA6NCM1 817 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 EPHX2P34913 555 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 DPF2Q92785 391 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
SUPT4H1-201ENST00000225504 SCN4AP35499 1836 aa17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 EGFRP00533 1210 aa17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 LMOD1P29536 600 aaPredicted RBP17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 CCDC102BQ68D86 513 aa17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 EAF2Q96CJ1 260 aaPredicted RBP17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 IL1RAPL2Q9NP60 686 aa17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 GPR108Q9NPR9 543 aa17.77■□□□□ 0.44
SUPT4H1-201ENST00000225504 FAM205AQ6ZU69 1335 aa17.77■□□□□ 0.43
SUPT4H1-201ENST00000225504 RPS12P25398 132 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms