RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 NBPF11Q86T75 865 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 PLEKHA4Q9H4M7 779 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 ARGLU1Q9NWB6 273 aaPredicted RBP16.67■□□□□ 0.26
SFXN3-201ENST00000224807 FHOD1Q9Y613 1164 aa16.67■□□□□ 0.26
SFXN3-201ENST00000224807 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
SFXN3-201ENST00000224807 DPF2Q92785 391 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
SFXN3-201ENST00000224807 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 EIF4A1P60842 406 aaKnown RBP16.66■□□□□ 0.26
SFXN3-201ENST00000224807 FAM160A1Q05DH4 1040 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 TFCP2Q12800 502 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 CCDC191Q8NCU4 936 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 MAP3K5Q99683 1374 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
SFXN3-201ENST00000224807 TMEM232C9JQI7 657 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 RAD51AP2Q09MP3 1159 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 WWC2Q6AWC2 1192 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 MYD88Q99836 296 aa16.66■□□□□ 0.26
SFXN3-201ENST00000224807 IRX2Q9BZI1 471 aaPredicted RBP16.66■□□□□ 0.26
SFXN3-201ENST00000224807 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
SFXN3-201ENST00000224807 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
SFXN3-201ENST00000224807 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
SFXN3-201ENST00000224807 CPLX1O14810 134 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 TFRCP02786 760 aaKnown RBP16.64■□□□□ 0.25
SFXN3-201ENST00000224807 HOXC9P31274 260 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 UBASH3AP57075 661 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 CCDC82Q8N4S0 544 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 GRM8O00222 908 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 NEMFO60524 1076 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 ADKP55263 362 aaKnown RBP16.64■□□□□ 0.25
SFXN3-201ENST00000224807 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 NSUN7Q8NE18 718 aaKnown RBP16.64■□□□□ 0.25
SFXN3-201ENST00000224807 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
SFXN3-201ENST00000224807 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.25
SFXN3-201ENST00000224807 TIMM10P62072 90 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 TPM4P67936 248 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 UBE3BQ7Z3V4 1068 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 AIFM3Q96NN9 605 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 HINFPQ9BQA5 517 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
SFXN3-201ENST00000224807 USP42Q9H9J4 1324 aaKnown RBP16.63■□□□□ 0.25
SFXN3-201ENST00000224807 AGLP35573 1532 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 FANCCQ00597 558 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 LZTFL1Q9NQ48 299 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 RSPH14Q9UHP6 348 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 LCMT1Q9UIC8 334 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 FKBP4Q02790 459 aaKnown RBP eCLIP16.63■□□□□ 0.25
SFXN3-201ENST00000224807 SYCP1Q15431 976 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 NBPF6Q5VWK0 638 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 KCNB2Q92953 911 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 NBPF4Q96M43 638 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 RABEP2Q9H5N1 569 aa16.63■□□□□ 0.25
SFXN3-201ENST00000224807 DBNLQ9UJU6 430 aaKnown RBP16.63■□□□□ 0.25
SFXN3-201ENST00000224807 GSDMDP57764 484 aa16.62■□□□□ 0.25
SFXN3-201ENST00000224807 TRMT44Q8IYL2 757 aaKnown RBP16.62■□□□□ 0.25
SFXN3-201ENST00000224807 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
SFXN3-201ENST00000224807 HIP1O00291 1037 aa16.62■□□□□ 0.25
SFXN3-201ENST00000224807 DBF4Q9UBU7 674 aaPredicted RBP16.62■□□□□ 0.25
SFXN3-201ENST00000224807 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 ETF1P62495 437 aaKnown RBP16.61■□□□□ 0.25
SFXN3-201ENST00000224807 COBLO75128 1261 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 SASH3O75995 380 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
SFXN3-201ENST00000224807 PNOCQ13519 176 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 CYP2C19P33261 490 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 MTX1Q13505 466 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 SMC1AQ14683 1233 aaKnown RBP16.61■□□□□ 0.25
SFXN3-201ENST00000224807 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
SFXN3-201ENST00000224807 CLIC6Q96NY7 704 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 WDR24Q96S15 920 aa16.61■□□□□ 0.25
SFXN3-201ENST00000224807 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
SFXN3-201ENST00000224807 CTAGE5O15320 804 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 ZNF202O95125 648 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 GDAP1L1Q96MZ0 367 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 SUGCTQ9HAC7 445 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 ADCY9O60503 1353 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 ADD1P35611 737 aaKnown RBP16.6■□□□□ 0.25
SFXN3-201ENST00000224807 KLHL10Q6JEL2 608 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 VPS18Q9P253 973 aa16.6■□□□□ 0.25
SFXN3-201ENST00000224807 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 ZSCAN26Q16670 478 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 CCDC12Q8WUD4 166 aaPredicted RBP16.59■□□□□ 0.25
SFXN3-201ENST00000224807 RCOR1Q9UKL0 485 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 RHOXF2BP0C7M4 288 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 CDC25BP30305 580 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 SARM1Q6SZW1 724 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
SFXN3-201ENST00000224807 RHOXF2Q9BQY4 288 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms