RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 STX1AQ16623 288 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 PDCL3Q9H2J4 239 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 CBX8Q9HC52 389 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 CCDC69A6NI79 296 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 DSCC1Q9BVC3 393 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 NAPBQ9H115 298 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 C1orf167Q5SNV9 1468 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
UBE2D4-201ENST00000222402 CDKL5O76039 1030 aa17.44■□□□□ 0.38
UBE2D4-201ENST00000222402 ZAP70P43403 619 aa17.44■□□□□ 0.38
UBE2D4-201ENST00000222402 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
UBE2D4-201ENST00000222402 NUP133Q8WUM0 1156 aa17.44■□□□□ 0.38
UBE2D4-201ENST00000222402 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
UBE2D4-201ENST00000222402 DYNC1I1O14576 645 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 RXRAP19793 462 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 TCIRG1Q13488 830 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 PIBF1Q8WXW3 757 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 NACAP1Q9BZK3 213 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 ABCF2Q9UG63 623 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 UTYO14607 1347 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 ADORA1P30542 326 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 ISM2Q6H9L7 571 aa17.43■□□□□ 0.38
UBE2D4-201ENST00000222402 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 IRS4O14654 1257 aaPredicted RBP17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 METAP2P50579 478 aaKnown RBP eCLIP17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 NBPF14Q5TI25 921 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 NBPF10Q6P3W6 841 aaKnown RBP17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 NBPF15Q8N660 670 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 H7C1W4 665 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 EXOC5O00471 708 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 ITGA6P23229 1130 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 MRPS27Q92552 414 aaKnown RBP17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 GPAA1O43292 621 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 PFKFB2O60825 505 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 CREBRFQ8IUR6 639 aa17.42■□□□□ 0.38
UBE2D4-201ENST00000222402 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 ZMYM1Q5SVZ6 1142 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 FTOQ9C0B1 505 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 TRIM22Q8IYM9 498 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 APPBP2Q92624 585 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 MAST3O60307 1309 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 PRIMPOLQ96LW4 560 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 USP28Q96RU2 1077 aa17.41■□□□□ 0.38
UBE2D4-201ENST00000222402 ELP1O95163 1332 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 GOLGA8AA7E2F4 631 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 CAVIN2O95810 425 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 SLC3A2P08195 630 aaKnown RBP17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 MARCKSP29966 332 aaPredicted RBP17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 RABL6Q3YEC7 729 aaPredicted RBP17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 CCDC112Q8NEF3 446 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 BTG4Q9NY30 223 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
UBE2D4-201ENST00000222402 SLC5A1P13866 664 aa17.39■□□□□ 0.38
UBE2D4-201ENST00000222402 IGHMBP2P38935 993 aaKnown RBP17.39■□□□□ 0.38
UBE2D4-201ENST00000222402 NSUN7Q8NE18 718 aaKnown RBP17.39■□□□□ 0.38
UBE2D4-201ENST00000222402 ALG1Q9BT22 464 aa17.39■□□□□ 0.38
UBE2D4-201ENST00000222402 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.38
UBE2D4-201ENST00000222402 TNNT1P13805 278 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 IARSP41252 1262 aaKnown RBP17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 AOPEPQ8N6M6 819 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 SLAIN2Q9P270 581 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 SLC12A7Q9Y666 1083 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 SERPINC1P01008 464 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 OSBP2Q969R2 916 aa17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 TRMT1Q9NXH9 659 aaKnown RBP17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
UBE2D4-201ENST00000222402 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 MED23Q9ULK4 1368 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 SPTLC2O15270 562 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 FGAP02671 866 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 DZIP3Q86Y13 1208 aaKnown RBP17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 PDIA3P30101 505 aaKnown RBP17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
UBE2D4-201ENST00000222402 KCNG4Q8TDN1 519 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms