RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
UPK1A-201ENST00000222275 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
UPK1A-201ENST00000222275 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
UPK1A-201ENST00000222275 GMLQ99445 158 aa17.07■□□□□ 0.32
UPK1A-201ENST00000222275 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
UPK1A-201ENST00000222275 PLIN1O60240 522 aa17.06■□□□□ 0.32
UPK1A-201ENST00000222275 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
UPK1A-201ENST00000222275 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
UPK1A-201ENST00000222275 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
UPK1A-201ENST00000222275 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
UPK1A-201ENST00000222275 IRS2Q9Y4H2 1338 aa17.05■□□□□ 0.32
UPK1A-201ENST00000222275 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
UPK1A-201ENST00000222275 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
UPK1A-201ENST00000222275 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
UPK1A-201ENST00000222275 PANK1Q8TE04 598 aa17.05■□□□□ 0.32
UPK1A-201ENST00000222275 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
UPK1A-201ENST00000222275 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 H7C1D1 291 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 TAF5LO75529 589 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 HSPA1AP0DMV8 641 aaKnown RBP17.04■□□□□ 0.32
UPK1A-201ENST00000222275 HSPA1BP0DMV9 641 aaKnown RBP17.04■□□□□ 0.32
UPK1A-201ENST00000222275 RLBP1P12271 317 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 CHRNDQ07001 517 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
UPK1A-201ENST00000222275 GNAI2P04899 355 aa17.03■□□□□ 0.32
UPK1A-201ENST00000222275 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
UPK1A-201ENST00000222275 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
UPK1A-201ENST00000222275 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
UPK1A-201ENST00000222275 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
UPK1A-201ENST00000222275 MYH3P11055 1940 aa17.03■□□□□ 0.32
UPK1A-201ENST00000222275 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
UPK1A-201ENST00000222275 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.32
UPK1A-201ENST00000222275 DEFB115Q30KQ5 88 aa17.02■□□□□ 0.32
UPK1A-201ENST00000222275 MEIS3Q99687 375 aa17.02■□□□□ 0.32
UPK1A-201ENST00000222275 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
UPK1A-201ENST00000222275 COG6Q9Y2V7 657 aa17.02■□□□□ 0.32
UPK1A-201ENST00000222275 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.31
UPK1A-201ENST00000222275 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
UPK1A-201ENST00000222275 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
UPK1A-201ENST00000222275 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
UPK1A-201ENST00000222275 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
UPK1A-201ENST00000222275 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
UPK1A-201ENST00000222275 PODNQ7Z5L7 613 aa17.01■□□□□ 0.31
UPK1A-201ENST00000222275 MPHOSPH8Q99549 860 aa17.01■□□□□ 0.31
UPK1A-201ENST00000222275 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
UPK1A-201ENST00000222275 LEMD3Q9Y2U8 911 aa17.01■□□□□ 0.31
UPK1A-201ENST00000222275 USP17L3A6NCW0 530 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 USP17L4A6NCW7 530 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 G3V3G9 751 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 CELF2O95319 508 aaKnown RBP17■□□□□ 0.31
UPK1A-201ENST00000222275 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
UPK1A-201ENST00000222275 AAMPQ13685 434 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 CCDC57Q2TAC2 916 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 ABT1Q9ULW3 272 aaKnown RBP17■□□□□ 0.31
UPK1A-201ENST00000222275 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 SPEF2Q9C093 1822 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 MED23Q9ULK4 1368 aa17■□□□□ 0.31
UPK1A-201ENST00000222275 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
UPK1A-201ENST00000222275 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
UPK1A-201ENST00000222275 CYP4F22Q6NT55 531 aa16.99■□□□□ 0.31
UPK1A-201ENST00000222275 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
UPK1A-201ENST00000222275 BICC1Q9H694 974 aaKnown RBP16.99■□□□□ 0.31
UPK1A-201ENST00000222275 TLL2Q9Y6L7 1015 aa16.99■□□□□ 0.31
UPK1A-201ENST00000222275 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
UPK1A-201ENST00000222275 FOXN1O15353 648 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 SCARF1Q14162 830 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 C20orf194Q5TEA3 1177 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 SAPCD2Q86UD0 394 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 ANKRD2Q9GZV1 360 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
UPK1A-201ENST00000222275 LRRFIP2Q9Y608 721 aaKnown RBP16.98■□□□□ 0.31
UPK1A-201ENST00000222275 AOC2O75106 756 aa16.97■□□□□ 0.31
UPK1A-201ENST00000222275 TAF7LQ5H9L4 462 aa16.97■□□□□ 0.31
UPK1A-201ENST00000222275 ZIC5Q96T25 663 aa16.97■□□□□ 0.31
UPK1A-201ENST00000222275 ZNF408Q9H9D4 720 aa16.97■□□□□ 0.31
UPK1A-201ENST00000222275 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
UPK1A-201ENST00000222275 WBP1LQ9NX94 342 aa16.97■□□□□ 0.31
UPK1A-201ENST00000222275 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 MTX1Q13505 466 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.31
UPK1A-201ENST00000222275 GTF2IP78347 998 aa16.95■□□□□ 0.3
UPK1A-201ENST00000222275 LRRC24Q50LG9 513 aa16.95■□□□□ 0.3
UPK1A-201ENST00000222275 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
UPK1A-201ENST00000222275 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
UPK1A-201ENST00000222275 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
UPK1A-201ENST00000222275 RPAP2Q8IXW5 612 aaPredicted RBP16.95■□□□□ 0.3
UPK1A-201ENST00000222275 KLHDC4Q8TBB5 520 aa16.95■□□□□ 0.3
UPK1A-201ENST00000222275 CAPNS2Q96L46 248 aa16.95■□□□□ 0.3
UPK1A-201ENST00000222275 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms