RNA–Protein interactions for RNA: ENST00000222266.2

PSENEN-201, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 603 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-201ENST00000222266 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
PSENEN-201ENST00000222266 GPC2Q8N158 579 aa12.53□□□□□ -0.4
PSENEN-201ENST00000222266 GCC1Q96CN9 775 aa12.53□□□□□ -0.4
PSENEN-201ENST00000222266 GPATCH3Q96I76 525 aa12.53□□□□□ -0.4
PSENEN-201ENST00000222266 LRRCC1Q9C099 1032 aa12.53□□□□□ -0.4
PSENEN-201ENST00000222266 USP17L3A6NCW0 530 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 USP17L4A6NCW7 530 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 GLTPD2A6NH11 291 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 FZD9O00144 591 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 SEMA3EO15041 775 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 IFIT2P09913 472 aaKnown RBP12.52□□□□□ -0.41
PSENEN-201ENST00000222266 RPS12P25398 132 aaKnown RBP12.52□□□□□ -0.41
PSENEN-201ENST00000222266 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
PSENEN-201ENST00000222266 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 USP17L1Q7RTZ2 530 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.41
PSENEN-201ENST00000222266 OGFOD1Q8N543 542 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 GJA3Q9Y6H8 435 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.41
PSENEN-201ENST00000222266 A0A1B0GUL7 405 aa12.51□□□□□ -0.41
PSENEN-201ENST00000222266 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
PSENEN-201ENST00000222266 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
PSENEN-201ENST00000222266 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
PSENEN-201ENST00000222266 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
PSENEN-201ENST00000222266 CD209Q9NNX6 404 aa12.51□□□□□ -0.41
PSENEN-201ENST00000222266 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
PSENEN-201ENST00000222266 APBB1O00213 710 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 SASH1O94885 1247 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 STRIP1Q5VSL9 837 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 ZGPATQ8N5A5 531 aaKnown RBP12.5□□□□□ -0.41
PSENEN-201ENST00000222266 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 DCTPP1Q9H773 170 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 HDAC9Q9UKV0 1011 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 DENND2AQ9ULE3 1009 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 LRRC37AA6NMS7 1700 aa12.5□□□□□ -0.41
PSENEN-201ENST00000222266 FER1L6Q2WGJ9 1857 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 H7C1D1 291 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 RAD17O75943 681 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 IL1R1P14778 569 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 VEGFAP15692 232 aaPredicted RBP12.49□□□□□ -0.41
PSENEN-201ENST00000222266 FGFR2P21802 821 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
PSENEN-201ENST00000222266 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 AGBL3Q8NEM8 1001 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
PSENEN-201ENST00000222266 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
PSENEN-201ENST00000222266 GYG1P46976 350 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 TIMM10P62072 90 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 FKBP1AP62942 108 aaKnown RBP12.48□□□□□ -0.41
PSENEN-201ENST00000222266 CXCL9Q07325 125 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 SPTY2D1Q68D10 685 aaPredicted RBP12.48□□□□□ -0.41
PSENEN-201ENST00000222266 FBXO33Q7Z6M2 555 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 AACSQ86V21 672 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
PSENEN-201ENST00000222266 SIRT2Q8IXJ6 389 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 DPF2Q92785 391 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 XAGE2Q96GT9 111 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
PSENEN-201ENST00000222266 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
PSENEN-201ENST00000222266 MAST3O60307 1309 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 IGSF3O75054 1194 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 VIL1P09327 827 aaKnown RBP12.47□□□□□ -0.41
PSENEN-201ENST00000222266 BCAMP50895 628 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 GTF2IP78347 998 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 RSBN1LQ6PCB5 846 aaPredicted RBP12.47□□□□□ -0.41
PSENEN-201ENST00000222266 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 TDRD7Q8NHU6 1098 aaKnown RBP12.47□□□□□ -0.41
PSENEN-201ENST00000222266 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
PSENEN-201ENST00000222266 HACL1Q9UJ83 578 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 SUGT1Q9Y2Z0 365 aa12.47□□□□□ -0.41
PSENEN-201ENST00000222266 SNAP23O00161 211 aa12.46□□□□□ -0.41
PSENEN-201ENST00000222266 PSMD14O00487 310 aa12.46□□□□□ -0.41
PSENEN-201ENST00000222266 ZBTB22O15209 634 aa12.46□□□□□ -0.41
PSENEN-201ENST00000222266 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
PSENEN-201ENST00000222266 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
PSENEN-201ENST00000222266 CCDC102BQ68D86 513 aa12.46□□□□□ -0.41
PSENEN-201ENST00000222266 L3MBTL3Q96JM7 780 aaPredicted RBP12.46□□□□□ -0.41
PSENEN-201ENST00000222266 IL1RAPL2Q9NP60 686 aa12.46□□□□□ -0.41
PSENEN-201ENST00000222266 GOLGB1Q14789 3259 aaKnown RBP12.46□□□□□ -0.42
PSENEN-201ENST00000222266 TAF1P21675 1872 aa12.46□□□□□ -0.42
PSENEN-201ENST00000222266 CHD4Q14839 1912 aa12.45□□□□□ -0.42
PSENEN-201ENST00000222266 FAM205AQ6ZU69 1335 aa12.45□□□□□ -0.42
PSENEN-201ENST00000222266 ERC2O15083 957 aa12.45□□□□□ -0.42
PSENEN-201ENST00000222266 USP17L8P0C7I0 530 aa12.45□□□□□ -0.42
PSENEN-201ENST00000222266 PRELPP51888 382 aa12.45□□□□□ -0.42
PSENEN-201ENST00000222266 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
PSENEN-201ENST00000222266 TTF1Q15361 905 aaPredicted RBP12.45□□□□□ -0.42
PSENEN-201ENST00000222266 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
PSENEN-201ENST00000222266 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
PSENEN-201ENST00000222266 CCDC136Q96JN2 1154 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms