RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 CCDC183Q5T5S1 534 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 SLC12A7Q9Y666 1083 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 NCOA7Q8NI08 942 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 USP5P45974 858 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 BCAMP50895 628 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 CDC5LQ99459 802 aaKnown RBP10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 HMG20BQ9P0W2 317 aa10.07□□□□□ -0.8
CSNK2A1-201ENST00000217244 A0A087WWV3 80 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 ATP5JP18859 108 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 MCM5P33992 734 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 METAP2P50579 478 aaKnown RBP eCLIP10.06□□□□□ -0.84e-7■■□□□ 12
CSNK2A1-201ENST00000217244 TPM4P67936 248 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 CTDSPL2Q05D32 466 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 NRKQ7Z2Y5 1582 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 GYG1P46976 350 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 GPT2Q8TD30 523 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 RRAGDQ9NQL2 400 aaPredicted RBP10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 CFAP45Q9UL16 551 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 CYP21A2P08686 494 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 IKQ13123 557 aaPredicted RBP10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 PHKBQ93100 1093 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 CCDC87Q9NVE4 849 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 LOC102724428A0A0B4J2F2 783 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 SIK1P57059 783 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 UBE2HP62256 183 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 TTC12Q9H892 705 aaPredicted RBP10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 VAT1LQ9HCJ6 419 aa10.06□□□□□ -0.8
CSNK2A1-201ENST00000217244 PDIA6Q15084 440 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 MFSD6Q6ZSS7 791 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 ZSCAN29Q8IWY8 852 aaPredicted RBP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 FTOQ9C0B1 505 aaKnown RBP eCLIP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 SCAND2PQ9GZW5 306 aaPredicted RBP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 ATG3Q9NT62 314 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.83e-7■□□□□ 8.4
CSNK2A1-201ENST00000217244 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 CLSTN1O94985 981 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 INCENPQ9NQS7 918 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 PXDNQ92626 1479 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 ADCY5O95622 1261 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 CRKLP46109 303 aaKnown RBP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 DHX8Q14562 1220 aaKnown RBP10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 LRSAM1Q6UWE0 723 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 KAZALD1Q96I82 304 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 GJB4Q9NTQ9 266 aa10.05□□□□□ -0.8
CSNK2A1-201ENST00000217244 PDE8AO60658 829 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 BRD1O95696 1058 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 KLHL10Q6JEL2 608 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 CCDC39Q9UFE4 941 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 CCNL1Q9UK58 526 aaPredicted RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 STX8Q9UNK0 236 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 RIMBP2O15034 1052 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 HMGB1P09429 215 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 HSPD1P10809 573 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 CTSWP56202 376 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 RPGRQ92834 1020 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 MKNK2Q9HBH9 465 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 SHPRHQ149N8 1683 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 SCARF1Q14162 830 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 SDR42E1Q8WUS8 393 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 A0A0G2JLW4 131 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 E7EWF7 191 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 C17orf53Q8N3J3 647 aaPredicted RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 OSBP2Q969R2 916 aa10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
CSNK2A1-201ENST00000217244 SPECC1Q5M775 1068 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 GIGYF2Q6Y7W6 1299 aaKnown RBP10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 ZBTB38Q8NAP3 1195 aaPredicted RBP10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 AOX1Q06278 1338 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 ZBTB43O43298 467 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 FGAP02671 866 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 CCDC102BQ68D86 513 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 NAA16Q6N069 864 aaPredicted RBP10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 LUZP1Q86V48 1076 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 NLRP10Q86W26 655 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 HOMER1Q86YM7 354 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 MAP4K1Q92918 833 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 RTCBQ9Y3I0 505 aaKnown RBP10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 MAP3K15Q6ZN16 1313 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 A0A1B0GVL5 298 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 HAUS7Q99871 368 aa10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 PUS7LQ9H0K6 701 aaKnown RBP10.03□□□□□ -0.8
CSNK2A1-201ENST00000217244 TSPY2A6NKD2 308 aa10.02□□□□□ -0.8
CSNK2A1-201ENST00000217244 ZNF165P49910 485 aa10.02□□□□□ -0.8
CSNK2A1-201ENST00000217244 HMGN5P82970 282 aaKnown RBP10.02□□□□□ -0.8
CSNK2A1-201ENST00000217244 ANO6Q4KMQ2 910 aa10.02□□□□□ -0.8
CSNK2A1-201ENST00000217244 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms