RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
CSTF1-201ENST00000217109 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
CSTF1-201ENST00000217109 IARSP41252 1262 aaKnown RBP11.35□□□□□ -0.59
CSTF1-201ENST00000217109 CBX1P83916 185 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 PDCL2Q8N4E4 241 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 NRKQ7Z2Y5 1582 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 EXOC5O00471 708 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 ZFYP08048 801 aaPredicted RBP11.35□□□□□ -0.59
CSTF1-201ENST00000217109 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 MRPS27Q92552 414 aaKnown RBP11.35□□□□□ -0.59
CSTF1-201ENST00000217109 HELLSQ9NRZ9 838 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 SPATA31D1Q6ZQQ2 1576 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 E7EWF7 191 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 XBP1P17861 261 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 ZAP70P43403 619 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 HAUS7Q99871 368 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 ALG1Q9BT22 464 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 SLC26A6Q9BXS9 759 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 ANKARQ7Z5J8 1434 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 A0A087WWV3 80 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 MNS1Q8NEH6 495 aa11.35□□□□□ -0.59
CSTF1-201ENST00000217109 FTOQ9C0B1 505 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSTF1-201ENST00000217109 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
CSTF1-201ENST00000217109 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
CSTF1-201ENST00000217109 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSTF1-201ENST00000217109 ZNF500O60304 480 aaPredicted RBP11.34□□□□□ -0.59
CSTF1-201ENST00000217109 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 TEX13AQ9BXU3 409 aaPredicted RBP11.34□□□□□ -0.59
CSTF1-201ENST00000217109 TAF6LQ9Y6J9 622 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 SCRN1Q12765 414 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 TMC6Q7Z403 805 aa11.34□□□□□ -0.59
CSTF1-201ENST00000217109 SPTLC2O15270 562 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 SKILP12757 684 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 ITGA6P23229 1130 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 RICTORQ6R327 1708 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 GPAA1O43292 621 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 SLC5A1P13866 664 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 ZBTB43O43298 467 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
CSTF1-201ENST00000217109 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
CSTF1-201ENST00000217109 ADORA1P30542 326 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 SLC4A8Q2Y0W8 1093 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 KLHL10Q6JEL2 608 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 PI16Q6UXB8 463 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 ZNF771Q7L3S4 317 aaPredicted RBP11.33□□□□□ -0.6
CSTF1-201ENST00000217109 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
CSTF1-201ENST00000217109 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
CSTF1-201ENST00000217109 LRMPQ12912 555 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 B4E1Z4 1266 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 RAD21O60216 631 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
CSTF1-201ENST00000217109 MIGA1Q8NAN2 632 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 MYL10Q9BUA6 226 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 SYKP43405 635 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
CSTF1-201ENST00000217109 BRMS1Q9HCU9 246 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 TPM1P09493 284 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 KCNG4Q8TDN1 519 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 BTG4Q9NY30 223 aa11.32□□□□□ -0.6
CSTF1-201ENST00000217109 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-201ENST00000217109 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
CSTF1-201ENST00000217109 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-201ENST00000217109 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSTF1-201ENST00000217109 V9GYY5 206 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-201ENST00000217109 CAVIN2O95810 425 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 PHKBQ93100 1093 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 TCIRG1Q13488 830 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 APPBP2Q92624 585 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 DIP2BQ9P265 1576 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
CSTF1-201ENST00000217109 FGAP02671 866 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 FAM160A1Q05DH4 1040 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 MARCH6O60337 910 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 KAZALD1Q96I82 304 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 LLPHQ9BRT6 129 aaKnown RBP11.3□□□□□ -0.6
CSTF1-201ENST00000217109 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
CSTF1-201ENST00000217109 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.64e-6■■■■□ 20.2
CSTF1-201ENST00000217109 NRBP1Q9UHY1 535 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.3□□□□□ -0.6
CSTF1-201ENST00000217109 SLC4A4Q9Y6R1 1079 aa11.3□□□□□ -0.6
CSTF1-201ENST00000217109 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms