RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 MYO5AQ9Y4I1 1855 aaKnown RBP9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 SYCE3A1L190 88 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 MCAMP43121 646 aa9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 FAM98CQ17RN3 349 aaKnown RBP9.49□□□□□ -0.89
HMGXB4-201ENST00000216106 TOM1O60784 492 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 HSP90B1P14625 803 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 RREB1Q92766 1687 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 FIBPO43427 364 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 FGD1P98174 961 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 CAMTA2O94983 1202 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 PDE8BO95263 885 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 TTLL5Q6EMB2 1281 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 DDX60Q8IY21 1712 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 BRF1Q92994 677 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 LRP5O75197 1615 aa9.48□□□□□ -0.89
HMGXB4-201ENST00000216106 LRRFIP1Q32MZ4 808 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 TICAM2Q86XR7 235 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 DNM1Q05193 864 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 PUS7LQ9H0K6 701 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 ABCC12Q96J65 1359 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 COL5A3P25940 1745 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 E7EWF7 191 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 KCNQ4P56696 695 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 FERMT3Q86UX7 667 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 UTP14AQ9BVJ6 771 aaKnown RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 SEC31BQ9NQW1 1179 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 NIP7Q9Y221 180 aaKnown RBP eCLIP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 CICQ96RK0 1608 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 SNAP23O00161 211 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 FOXP2O15409 715 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 JAK2O60674 1132 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 ZFYP08048 801 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 PHKA1P46020 1223 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 TMEM87AQ8NBN3 555 aa9.47□□□□□ -0.89
HMGXB4-201ENST00000216106 HAND2P61296 217 aa9.46□□□□□ -0.89
HMGXB4-201ENST00000216106 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.89
HMGXB4-201ENST00000216106 CHST3Q7LGC8 479 aa9.46□□□□□ -0.89
HMGXB4-201ENST00000216106 APPBP2Q92624 585 aa9.46□□□□□ -0.89
HMGXB4-201ENST00000216106 HMGB1P09429 215 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 CCDC102BQ68D86 513 aa9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 RBSNQ9H1K0 784 aa9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 PUM3Q15397 648 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 LRSAM1Q6UWE0 723 aa9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 NGLY1Q96IV0 654 aa9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 MPHOSPH8Q99549 860 aa9.46□□□□□ -0.9
HMGXB4-201ENST00000216106 ARAP2Q8WZ64 1704 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 GPAA1O43292 621 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 IDH1O75874 414 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 PDCP20941 246 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 APOBRQ0VD83 1088 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 SCRN1Q12765 414 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 FAM173BQ6P4H8 233 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 MROH5Q6ZUA9 1318 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 UBAP1LF5GYI3 381 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 NTSR2O95665 410 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 PARP10Q53GL7 1025 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 SLC9C2Q5TAH2 1124 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 LPIN2Q92539 896 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 SMARCC1Q92922 1105 aaPredicted RBP9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 AK7Q96M32 723 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.45□□□□□ -0.91e-6■■■■□ 21.2
HMGXB4-201ENST00000216106 LAMB2P55268 1798 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 FGAP02671 866 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 LINC00116Q8NCU8 138 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 DDX11Q96FC9 970 aa9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
HMGXB4-201ENST00000216106 BCL9LQ86UU0 1499 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 UBE2HP62256 183 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 EXOSC10Q01780 885 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 PTF1AQ7RTS3 328 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 FGFR2P21802 821 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 ARID4AP29374 1257 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 ADD2P35612 726 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 IMMTQ16891 758 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 SMIM5Q71RC9 77 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 ZNF512BQ96KM6 892 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 COL4A1P02462 1669 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 FAM43AQ8N2R8 423 aa9.44□□□□□ -0.9
HMGXB4-201ENST00000216106 PPFIA3O75145 1194 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 CASZ1Q86V15 1759 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 TAF1P21675 1872 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 PFKFB2O60825 505 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 SLC5A1P13866 664 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
HMGXB4-201ENST00000216106 NCOA5Q9HCD5 579 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms