RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CLASRPQ8N2M8 674 aaKnown RBP24.86■■□□□ 1.57
RHBDD3-201ENST00000216085 RIMBP2O15034 1052 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 C15orf52Q6ZUT6 534 aaKnown RBP24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 ZNF804AQ7Z570 1209 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 VPS37DQ86XT2 251 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 NIM1KQ8IY84 436 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 FGFR2P21802 821 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 TNNI3KQ59H18 835 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 GPR101Q96P66 508 aaPredicted RBP24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 RNF181Q9P0P0 153 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 FPGT-TNNI3KV9GXZ4 949 aa24.85■■□□□ 1.57
RHBDD3-201ENST00000216085 ZNF609O15014 1411 aa24.84■■□□□ 1.57
RHBDD3-201ENST00000216085 A0A1B0GUL7 405 aa24.84■■□□□ 1.57
RHBDD3-201ENST00000216085 NEUROD6Q96NK8 337 aa24.84■■□□□ 1.57
RHBDD3-201ENST00000216085 SNAP23O00161 211 aa24.83■■□□□ 1.57
RHBDD3-201ENST00000216085 GORABQ5T7V8 394 aa24.82■■□□□ 1.56
RHBDD3-201ENST00000216085 CCDC136Q96JN2 1154 aa24.82■■□□□ 1.56
RHBDD3-201ENST00000216085 C9orf131Q5VYM1 1079 aa24.82■■□□□ 1.56
RHBDD3-201ENST00000216085 COA1Q9GZY4 146 aa24.82■■□□□ 1.56
RHBDD3-201ENST00000216085 IL1RAPL2Q9NP60 686 aa24.82■■□□□ 1.56
RHBDD3-201ENST00000216085 IGHDP01880 384 aa24.81■■□□□ 1.56
RHBDD3-201ENST00000216085 WTIPA6NIX2 430 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 HIBADHP31937 336 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 TIMM10P62072 90 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 AACSQ86V21 672 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 SMC5Q8IY18 1101 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 GNL3LQ9NVN8 582 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 ZC3H4Q9UPT8 1303 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 SBF1O95248 1867 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 IFIT2P09913 472 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 KLRK1P26718 216 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 PODNQ7Z5L7 613 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 BCL11AQ9H165 835 aa24.8■■□□□ 1.56
RHBDD3-201ENST00000216085 ECE2O60344 883 aa24.79■■□□□ 1.56
RHBDD3-201ENST00000216085 ARAP2Q8WZ64 1704 aa24.79■■□□□ 1.56
RHBDD3-201ENST00000216085 XAGE2Q96GT9 111 aa24.79■■□□□ 1.56
RHBDD3-201ENST00000216085 ZNRF3Q9ULT6 936 aa24.79■■□□□ 1.56
RHBDD3-201ENST00000216085 CCDC88AQ3V6T2 1871 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 GYG1P46976 350 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 DOK7Q18PE1 504 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 ANKRD45Q5TZF3 282 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 TXNRD3Q86VQ6 643 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 DBNDD1Q9H9R9 158 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 PPP4R2Q9NY27 417 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 IRS2Q9Y4H2 1338 aa24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 DICER1Q9UPY3 1922 aaKnown RBP24.78■■□□□ 1.56
RHBDD3-201ENST00000216085 FAM84BQ96KN1 310 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 FRAT2O75474 233 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 PRELPP51888 382 aa24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 EIF6P56537 245 aaKnown RBP24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 CCDC158Q5M9N0 1113 aa24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 EAF2Q96CJ1 260 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-201ENST00000216085 FBXO33Q7Z6M2 555 aa24.76■■□□□ 1.55
RHBDD3-201ENST00000216085 CD209Q9NNX6 404 aa24.76■■□□□ 1.55
RHBDD3-201ENST00000216085 TIAM2Q8IVF5 1701 aa24.76■■□□□ 1.55
RHBDD3-201ENST00000216085 ADORA1P30542 326 aa24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 B4GALNT3Q6L9W6 998 aa24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 CENPQQ7L2Z9 268 aaPredicted RBP24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 GPATCH3Q96I76 525 aa24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 CCDC8Q9H0W5 538 aaPredicted RBP24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 SMARCA5O60264 1052 aaPredicted RBP24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 BCAMP50895 628 aa24.75■■□□□ 1.55
RHBDD3-201ENST00000216085 CHD4Q14839 1912 aa24.74■■□□□ 1.55
RHBDD3-201ENST00000216085 IL1R1P14778 569 aa24.74■■□□□ 1.55
RHBDD3-201ENST00000216085 CCDC102BQ68D86 513 aa24.74■■□□□ 1.55
RHBDD3-201ENST00000216085 DBNDD2Q9BQY9 259 aa24.74■■□□□ 1.55
RHBDD3-201ENST00000216085 DBNLQ9UJU6 430 aaKnown RBP24.74■■□□□ 1.55
RHBDD3-201ENST00000216085 FZD9O00144 591 aa24.73■■□□□ 1.55
RHBDD3-201ENST00000216085 TTC39AQ5SRH9 613 aa24.73■■□□□ 1.55
RHBDD3-201ENST00000216085 COL4A5P29400 1685 aa24.73■■□□□ 1.55
RHBDD3-201ENST00000216085 SEMA3EO15041 775 aa24.72■■□□□ 1.55
RHBDD3-201ENST00000216085 UQCRFS1P1P0C7P4 283 aa24.72■■□□□ 1.55
RHBDD3-201ENST00000216085 TNIP1Q15025 636 aa24.72■■□□□ 1.55
RHBDD3-201ENST00000216085 NUCB1Q02818 461 aa24.72■■□□□ 1.55
RHBDD3-201ENST00000216085 CHD1LQ86WJ1 897 aa24.72■■□□□ 1.55
RHBDD3-201ENST00000216085 PHKA1P46020 1223 aa24.71■■□□□ 1.55
RHBDD3-201ENST00000216085 DPY19L2Q6NUT2 758 aa24.71■■□□□ 1.55
RHBDD3-201ENST00000216085 TDRD7Q8NHU6 1098 aaKnown RBP24.71■■□□□ 1.55
RHBDD3-201ENST00000216085 FBXW7Q969H0 707 aa24.71■■□□□ 1.55
RHBDD3-201ENST00000216085 TLR7Q9NYK1 1049 aaKnown RBP24.71■■□□□ 1.55
RHBDD3-201ENST00000216085 CIAPIN1Q6FI81 312 aa24.7■■□□□ 1.55
RHBDD3-201ENST00000216085 DENND2AQ9ULE3 1009 aa24.7■■□□□ 1.55
RHBDD3-201ENST00000216085 USP17L3A6NCW0 530 aa24.7■■□□□ 1.54
RHBDD3-201ENST00000216085 USP17L4A6NCW7 530 aa24.7■■□□□ 1.54
RHBDD3-201ENST00000216085 YDJCA8MPS7 323 aa24.7■■□□□ 1.54
RHBDD3-201ENST00000216085 USP17L1Q7RTZ2 530 aa24.7■■□□□ 1.54
RHBDD3-201ENST00000216085 LNPKQ9C0E8 428 aa24.7■■□□□ 1.54
RHBDD3-201ENST00000216085 KDM2BQ8NHM5 1336 aa24.69■■□□□ 1.54
RHBDD3-201ENST00000216085 RAD17O75943 681 aa24.69■■□□□ 1.54
RHBDD3-201ENST00000216085 STRIP1Q5VSL9 837 aa24.69■■□□□ 1.54
RHBDD3-201ENST00000216085 ZNF512BQ96KM6 892 aaPredicted RBP24.69■■□□□ 1.54
RHBDD3-201ENST00000216085 IQSEC3Q9UPP2 1182 aaPredicted RBP24.69■■□□□ 1.54
RHBDD3-201ENST00000216085 ZBTB22O15209 634 aa24.68■■□□□ 1.54
RHBDD3-201ENST00000216085 ARID4AP29374 1257 aaPredicted RBP24.68■■□□□ 1.54
RHBDD3-201ENST00000216085 TTLL5Q6EMB2 1281 aa24.68■■□□□ 1.54
RHBDD3-201ENST00000216085 GTF2IP78347 998 aa24.67■■□□□ 1.54
RHBDD3-201ENST00000216085 CXCL9Q07325 125 aa24.67■■□□□ 1.54
RHBDD3-201ENST00000216085 MYO3BQ8WXR4 1341 aa24.67■■□□□ 1.54
RHBDD3-201ENST00000216085 GPC2Q8N158 579 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms