RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 SP8Q8IXZ3 490 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 LPIN2Q92539 896 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 ANKRD2Q9GZV1 360 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 GPR108Q9NPR9 543 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 NDUFB9Q9Y6M9 179 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 XDHP47989 1333 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 UFL1O94874 794 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 SLC5A1P13866 664 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 PIM2Q9P1W9 311 aa12.16□□□□□ -0.46
RTCB-201ENST00000216038 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
RTCB-201ENST00000216038 ZNF804BA4D1E1 1349 aa12.15□□□□□ -0.46
RTCB-201ENST00000216038 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
RTCB-201ENST00000216038 GYG1P46976 350 aa12.15□□□□□ -0.46
RTCB-201ENST00000216038 BCAMP50895 628 aa12.15□□□□□ -0.46
RTCB-201ENST00000216038 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
RTCB-201ENST00000216038 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
RTCB-201ENST00000216038 POLLQ9UGP5 575 aa12.15□□□□□ -0.46
RTCB-201ENST00000216038 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
RTCB-201ENST00000216038 IFIT1P09914 478 aaKnown RBP12.15□□□□□ -0.47
RTCB-201ENST00000216038 PHKA1P46020 1223 aa12.15□□□□□ -0.47
RTCB-201ENST00000216038 TMC4Q7Z404 712 aa12.15□□□□□ -0.47
RTCB-201ENST00000216038 PI4K2BQ8TCG2 481 aa12.15□□□□□ -0.47
RTCB-201ENST00000216038 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.47
RTCB-201ENST00000216038 BOLA2Q9H3K6 86 aa12.15□□□□□ -0.47
RTCB-201ENST00000216038 GGA1Q9UJY5 639 aa12.15□□□□□ -0.47
RTCB-201ENST00000216038 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
RTCB-201ENST00000216038 UBE4AQ14139 1066 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 PI16Q6UXB8 463 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 DPP8Q6V1X1 898 aaPredicted RBP12.14□□□□□ -0.47
RTCB-201ENST00000216038 MPNDQ8N594 471 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 TBC1D16Q8TBP0 767 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 GPATCH3Q96I76 525 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
RTCB-201ENST00000216038 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
RTCB-201ENST00000216038 TTC39AQ5SRH9 613 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 TTC22Q5TAA0 569 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 CCDC102BQ68D86 513 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
RTCB-201ENST00000216038 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 LTBP1Q14766 1721 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 ARAP2Q8WZ64 1704 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 SCARF1Q14162 830 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 VPS37DQ86XT2 251 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
RTCB-201ENST00000216038 SYT17Q9BSW7 474 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 OSBPL3Q9H4L5 887 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
RTCB-201ENST00000216038 TTC41PQ6P2S7 1318 aa12.12□□□□□ -0.47
RTCB-201ENST00000216038 DUOX1Q9NRD9 1551 aa12.12□□□□□ -0.47
RTCB-201ENST00000216038 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
RTCB-201ENST00000216038 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
RTCB-201ENST00000216038 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
RTCB-201ENST00000216038 LEMD3Q9Y2U8 911 aa12.12□□□□□ -0.47
RTCB-201ENST00000216038 ERC2O15083 957 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 GLRX3O76003 335 aaKnown RBP12.11□□□□□ -0.47
RTCB-201ENST00000216038 ATP5JP18859 108 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
RTCB-201ENST00000216038 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 SDSP20132 328 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 MCAMP43121 646 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
RTCB-201ENST00000216038 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
RTCB-201ENST00000216038 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
RTCB-201ENST00000216038 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 MYO5AQ9Y4I1 1855 aaKnown RBP12.1□□□□□ -0.47
RTCB-201ENST00000216038 IRS2Q9Y4H2 1338 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 MYH13Q9UKX3 1938 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 WASHC4Q2M389 1173 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
RTCB-201ENST00000216038 CHD4Q14839 1912 aa12.09□□□□□ -0.47
RTCB-201ENST00000216038 AOX1Q06278 1338 aa12.09□□□□□ -0.47
RTCB-201ENST00000216038 SNED1Q8TER0 1413 aa12.09□□□□□ -0.47
RTCB-201ENST00000216038 GOLIM4O00461 696 aa12.09□□□□□ -0.47
RTCB-201ENST00000216038 ZAP70P43403 619 aa12.09□□□□□ -0.47
RTCB-201ENST00000216038 FBXO33Q7Z6M2 555 aa12.09□□□□□ -0.47
RTCB-201ENST00000216038 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
RTCB-201ENST00000216038 ARID4AP29374 1257 aaPredicted RBP12.08□□□□□ -0.48
RTCB-201ENST00000216038 AOC3Q16853 763 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 TBC1D9Q6ZT07 1266 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 HAUS7Q99871 368 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 BACH2Q9BYV9 841 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
RTCB-201ENST00000216038 HMG20BQ9P0W2 317 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
RTCB-201ENST00000216038 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 ZNF804AQ7Z570 1209 aa12.08□□□□□ -0.48
RTCB-201ENST00000216038 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms