RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 EDC3Q96F86 508 aaKnown RBP19.36■□□□□ 0.69
SNRPD3-201ENST00000215829 PAG1Q9NWQ8 432 aa19.36■□□□□ 0.69
SNRPD3-201ENST00000215829 ATP6V0A2Q9Y487 856 aa19.36■□□□□ 0.69
SNRPD3-201ENST00000215829 MCAMP43121 646 aa19.35■□□□□ 0.69
SNRPD3-201ENST00000215829 GPSM2P81274 684 aa19.35■□□□□ 0.69
SNRPD3-201ENST00000215829 SCARF1Q14162 830 aa19.35■□□□□ 0.69
SNRPD3-201ENST00000215829 SLC51AQ86UW1 340 aa19.35■□□□□ 0.69
SNRPD3-201ENST00000215829 PSDA5PKW4 1024 aaPredicted RBP19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 GOLIM4O00461 696 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 CHRNA5P30532 468 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 CAVIN4Q5BKX8 364 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 FSD1Q9BTV5 496 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 UPF2Q9HAU5 1272 aaKnown RBP19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 PODXL2Q9NZ53 605 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 NSFL1CQ9UNZ2 370 aaKnown RBP19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 HIP1O00291 1037 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 CNKSR1Q969H4 720 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 SNRKQ9NRH2 765 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 AKAP11Q9UKA4 1901 aa19.34■□□□□ 0.69
SNRPD3-201ENST00000215829 LRRC37AA6NMS7 1700 aa19.33■□□□□ 0.69
SNRPD3-201ENST00000215829 ATP2B4P23634 1241 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 ZAP70P43403 619 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 GYG1P46976 350 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 FBXO33Q7Z6M2 555 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 TICAM2Q86XR7 235 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 KBTBD3Q8NAB2 608 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 FAM84BQ96KN1 310 aaPredicted RBP19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 ESYT1Q9BSJ8 1104 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.68
SNRPD3-201ENST00000215829 DIAPH3Q9NSV4 1193 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 GNL3LQ9NVN8 582 aaKnown RBP19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 RFX7Q2KHR2 1363 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 KIF13BQ9NQT8 1826 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 KLRK1P26718 216 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 PI16Q6UXB8 463 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 C15orf52Q6ZUT6 534 aaKnown RBP19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 ANTXR1Q9H6X2 564 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 HMG20BQ9P0W2 317 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 GGA1Q9UJY5 639 aa19.32■□□□□ 0.68
SNRPD3-201ENST00000215829 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
SNRPD3-201ENST00000215829 PRPF40BQ6NWY9 871 aaKnown RBP19.31■□□□□ 0.68
SNRPD3-201ENST00000215829 SPATA5Q8NB90 893 aa19.31■□□□□ 0.68
SNRPD3-201ENST00000215829 SGIP1Q9BQI5 828 aa19.31■□□□□ 0.68
SNRPD3-201ENST00000215829 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
SNRPD3-201ENST00000215829 UFL1O94874 794 aa19.3■□□□□ 0.68
SNRPD3-201ENST00000215829 HIBADHP31937 336 aaKnown RBP19.3■□□□□ 0.68
SNRPD3-201ENST00000215829 CWC27Q6UX04 472 aaKnown RBP19.3■□□□□ 0.68
SNRPD3-201ENST00000215829 RUFY2Q8WXA3 655 aa19.3■□□□□ 0.68
SNRPD3-201ENST00000215829 REC8O95072 547 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 CYP2E1P05181 493 aaPredicted RBP19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 TTF1Q15361 905 aaPredicted RBP19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 TBC1D16Q8TBP0 767 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 POLLQ9UGP5 575 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 CACNA1SQ13698 1873 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 LTBP1Q14766 1721 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 DLEC1Q9Y238 1755 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 ZBTB22O15209 634 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 SGSM2O43147 1006 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 MPNDQ8N594 471 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 SLX4Q8IY92 1834 aa19.29■□□□□ 0.68
SNRPD3-201ENST00000215829 SEMA3EO15041 775 aa19.28■□□□□ 0.68
SNRPD3-201ENST00000215829 TGFB2P61812 414 aa19.28■□□□□ 0.68
SNRPD3-201ENST00000215829 A0A0G2JLW4 131 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 DPEP1P16444 411 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 KCNA3P22001 575 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 PTGER2P43116 358 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 NMIQ13287 307 aaPredicted RBP19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 LRRFIP1Q32MZ4 808 aaKnown RBP19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 OLFM4Q6UX06 510 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 C7orf43Q8WVR3 580 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 FAM227BQ96M60 508 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 TBC1D32Q96NH3 1257 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 C22orf23Q9BZE7 217 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 IL25Q9H293 177 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 DENND2AQ9ULE3 1009 aa19.27■□□□□ 0.68
SNRPD3-201ENST00000215829 C6orf229H3BNL8 230 aa19.27■□□□□ 0.67
SNRPD3-201ENST00000215829 DPP8Q6V1X1 898 aaPredicted RBP19.27■□□□□ 0.67
SNRPD3-201ENST00000215829 TTLL6Q8N841 843 aa19.27■□□□□ 0.67
SNRPD3-201ENST00000215829 USP26Q9BXU7 913 aa19.27■□□□□ 0.67
SNRPD3-201ENST00000215829 IQSEC3Q9UPP2 1182 aaPredicted RBP19.27■□□□□ 0.67
SNRPD3-201ENST00000215829 RNF113AO15541 343 aaKnown RBP19.26■□□□□ 0.67
SNRPD3-201ENST00000215829 GPR101Q96P66 508 aaPredicted RBP19.26■□□□□ 0.67
SNRPD3-201ENST00000215829 PIH1D3Q9NQM4 214 aaKnown RBP19.26■□□□□ 0.67
SNRPD3-201ENST00000215829 ZFYP08048 801 aaPredicted RBP19.25■□□□□ 0.67
SNRPD3-201ENST00000215829 ZNF804AQ7Z570 1209 aa19.25■□□□□ 0.67
SNRPD3-201ENST00000215829 RAD50Q92878 1312 aa19.25■□□□□ 0.67
SNRPD3-201ENST00000215829 MED23Q9ULK4 1368 aa19.25■□□□□ 0.67
SNRPD3-201ENST00000215829 A0A0D9SFI3 127 aa19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 FRAT2O75474 233 aaPredicted RBP19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 CC2D2BQ6DHV5 1058 aa19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 PDS5AQ29RF7 1337 aaKnown RBP19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 CHGBP05060 677 aa19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 RBM25P49756 843 aaKnown RBP19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
SNRPD3-201ENST00000215829 TDRD7Q8NHU6 1098 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms