RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 STK11IPQ8N1F8 1099 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 SDF4Q9BRK5 362 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 N4BP2Q86UW6 1770 aaPredicted RBP9.73□□□□□ -0.85
CDC27-201ENST00000066544 KINO60870 393 aaKnown RBP9.73□□□□□ -0.85
CDC27-201ENST00000066544 APPP05067 770 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 GOLPH3LQ9H4A5 285 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 A0A1B0GVL5 298 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 RNF113AO15541 343 aaKnown RBP9.73□□□□□ -0.85
CDC27-201ENST00000066544 PFKFB2O60825 505 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
CDC27-201ENST00000066544 CLIP2Q9UDT6 1046 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 DENND2AQ9ULE3 1009 aa9.73□□□□□ -0.85
CDC27-201ENST00000066544 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
CDC27-201ENST00000066544 ZNF75DP51815 510 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 PDIA3P30101 505 aaKnown RBP9.72□□□□□ -0.85
CDC27-201ENST00000066544 ZAP70P43403 619 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.857e-7■■■■□ 20.4
CDC27-201ENST00000066544 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 CPLX1O14810 134 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 CCDC144BQ3MJ40 725 aa9.72□□□□□ -0.85
CDC27-201ENST00000066544 CCDC158Q5M9N0 1113 aa9.71□□□□□ -0.85
CDC27-201ENST00000066544 DNAJC10Q8IXB1 793 aa9.71□□□□□ -0.85
CDC27-201ENST00000066544 SYTL4Q96C24 671 aaPredicted RBP9.71□□□□□ -0.85
CDC27-201ENST00000066544 XAGE2Q96GT9 111 aa9.71□□□□□ -0.85
CDC27-201ENST00000066544 ZSCAN16Q9H4T2 348 aaPredicted RBP9.71□□□□□ -0.85
CDC27-201ENST00000066544 OVOS2A0A0G2JMS6 1433 aa9.71□□□□□ -0.85
CDC27-201ENST00000066544 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.85
CDC27-201ENST00000066544 EVA1CP58658 441 aa9.71□□□□□ -0.85
CDC27-201ENST00000066544 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.85
CDC27-201ENST00000066544 CACTINQ8WUQ7 758 aaKnown RBP9.71□□□□□ -0.85
CDC27-201ENST00000066544 SLIT3O75094 1523 aa9.71□□□□□ -0.86
CDC27-201ENST00000066544 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.86
CDC27-201ENST00000066544 STK38Q15208 465 aa9.71□□□□□ -0.86
CDC27-201ENST00000066544 IDH1O75874 414 aaKnown RBP9.71□□□□□ -0.86
CDC27-201ENST00000066544 ADD1P35611 737 aaKnown RBP9.71□□□□□ -0.86
CDC27-201ENST00000066544 RALYLQ86SE5 291 aaKnown RBP9.71□□□□□ -0.86
CDC27-201ENST00000066544 AIFM3Q96NN9 605 aa9.71□□□□□ -0.86
CDC27-201ENST00000066544 PUS7LQ9H0K6 701 aaKnown RBP9.71□□□□□ -0.86
CDC27-201ENST00000066544 HELLSQ9NRZ9 838 aa9.71□□□□□ -0.86
CDC27-201ENST00000066544 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
CDC27-201ENST00000066544 SNAP23O00161 211 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 PRC1O43663 620 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 FGAP02671 866 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 SMARCC2Q8TAQ2 1214 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
CDC27-201ENST00000066544 SH3TC1Q8TE82 1336 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 HMGB1P09429 215 aaKnown RBP9.7□□□□□ -0.86
CDC27-201ENST00000066544 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 ALDH8A1Q9H2A2 487 aaPredicted RBP9.7□□□□□ -0.86
CDC27-201ENST00000066544 BCL2L12Q9HB09 334 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 ASAP1Q9ULH1 1129 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 C5P01031 1676 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 CRYBG1Q9Y4K1 1723 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
CDC27-201ENST00000066544 ZRSR1Q15695 479 aaKnown RBP9.7□□□□□ -0.86
CDC27-201ENST00000066544 METTL24Q5JXM2 366 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 AOPEPQ8N6M6 819 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
CDC27-201ENST00000066544 ZSCAN25Q6NSZ9 544 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 DSCC1Q9BVC3 393 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 SPTLC3Q9NUV7 552 aa9.7□□□□□ -0.86
CDC27-201ENST00000066544 TPD52L1Q16890 204 aaPredicted RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 CCDC191Q8NCU4 936 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 FDPSP14324 419 aaKnown RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 MARCKSP29966 332 aaPredicted RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 CBX1P83916 185 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 LDHAL6AQ6ZMR3 332 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 ZNF396Q96N95 335 aaPredicted RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 PDIA4P13667 645 aaKnown RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 IFIT5Q13325 482 aaKnown RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 IMMTQ16891 758 aaKnown RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 INCENPQ9NQS7 918 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 CLIC4Q9Y696 253 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 TDRD7Q8NHU6 1098 aaKnown RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 CNNM1Q9NRU3 951 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 TNNT1P13805 278 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 ILDR1Q86SU0 546 aaPredicted RBP9.69□□□□□ -0.86
CDC27-201ENST00000066544 JCADQ9P266 1359 aa9.69□□□□□ -0.86
CDC27-201ENST00000066544 USP54Q70EL1 1684 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 NAA16Q6N069 864 aaPredicted RBP9.68□□□□□ -0.86
CDC27-201ENST00000066544 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 MAP7D2Q96T17 732 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 MYL10Q9BUA6 226 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 LLPHQ9BRT6 129 aaKnown RBP9.68□□□□□ -0.86
CDC27-201ENST00000066544 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 TMOD3Q9NYL9 352 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC27-201ENST00000066544 V9GYY5 206 aaPredicted RBP9.68□□□□□ -0.86
CDC27-201ENST00000066544 CARMIL3Q8ND23 1372 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 GPAA1O43292 621 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 STX1AQ16623 288 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms