RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 MCAMP43121 646 aa30.96■■■□□ 2.55
RTN4R-201ENST00000043402 FOXP2O15409 715 aa30.95■■■□□ 2.55
RTN4R-201ENST00000043402 DNM1Q05193 864 aaKnown RBP30.95■■■□□ 2.55
RTN4R-201ENST00000043402 BARGINQ6ZT62 677 aa30.95■■■□□ 2.55
RTN4R-201ENST00000043402 GTF3C6Q969F1 213 aa30.95■■■□□ 2.55
RTN4R-201ENST00000043402 ABCC12Q96J65 1359 aa30.95■■■□□ 2.54
RTN4R-201ENST00000043402 PDE8BO95263 885 aa30.94■■■□□ 2.54
RTN4R-201ENST00000043402 CDC37L1Q7L3B6 337 aa30.94■■■□□ 2.54
RTN4R-201ENST00000043402 DHX32Q7L7V1 743 aaKnown RBP30.94■■■□□ 2.54
RTN4R-201ENST00000043402 BRF1Q92994 677 aa30.94■■■□□ 2.54
RTN4R-201ENST00000043402 ZFYP08048 801 aaPredicted RBP30.93■■■□□ 2.54
RTN4R-201ENST00000043402 HMGB1P09429 215 aaKnown RBP30.93■■■□□ 2.54
RTN4R-201ENST00000043402 PIP4K2BP78356 416 aa30.93■■■□□ 2.54
RTN4R-201ENST00000043402 TTLL5Q6EMB2 1281 aa30.93■■■□□ 2.54
RTN4R-201ENST00000043402 E7EWF7 191 aa30.93■■■□□ 2.54
RTN4R-201ENST00000043402 FIBPO43427 364 aa30.93■■■□□ 2.54
RTN4R-201ENST00000043402 HCLS1P14317 486 aaPredicted RBP30.93■■■□□ 2.54
RTN4R-201ENST00000043402 LRRFIP1Q32MZ4 808 aaKnown RBP30.93■■■□□ 2.54
RTN4R-201ENST00000043402 NWD2Q9ULI1 1742 aa30.93■■■□□ 2.54
RTN4R-201ENST00000043402 RREB1Q92766 1687 aa30.92■■■□□ 2.54
RTN4R-201ENST00000043402 CAMTA2O94983 1202 aa30.92■■■□□ 2.54
RTN4R-201ENST00000043402 EXOSC10Q01780 885 aaKnown RBP30.92■■■□□ 2.54
RTN4R-201ENST00000043402 WASHC4Q2M389 1173 aa30.92■■■□□ 2.54
RTN4R-201ENST00000043402 KCNQ2O43526 872 aa30.92■■■□□ 2.54
RTN4R-201ENST00000043402 PUS7LQ9H0K6 701 aaKnown RBP30.92■■■□□ 2.54
RTN4R-201ENST00000043402 RRAGDQ9NQL2 400 aaPredicted RBP30.92■■■□□ 2.54
RTN4R-201ENST00000043402 FAM177BA6PVY3 158 aa30.91■■■□□ 2.54
RTN4R-201ENST00000043402 JAK2O60674 1132 aa30.91■■■□□ 2.54
RTN4R-201ENST00000043402 PDCP20941 246 aa30.91■■■□□ 2.54
RTN4R-201ENST00000043402 MYH7P12883 1935 aa30.91■■■□□ 2.54
RTN4R-201ENST00000043402 ZNF512BQ96KM6 892 aaPredicted RBP30.9■■■□□ 2.54
RTN4R-201ENST00000043402 LRP5O75197 1615 aa30.9■■■□□ 2.54
RTN4R-201ENST00000043402 PDIA4P13667 645 aaKnown RBP30.9■■■□□ 2.54
RTN4R-201ENST00000043402 HSP90B1P14625 803 aaKnown RBP30.9■■■□□ 2.54
RTN4R-201ENST00000043402 UBE2HP62256 183 aa30.9■■■□□ 2.54
RTN4R-201ENST00000043402 APPBP2Q92624 585 aa30.9■■■□□ 2.54
RTN4R-201ENST00000043402 AK7Q96M32 723 aa30.9■■■□□ 2.54
RTN4R-201ENST00000043402 SYAP1Q96A49 352 aaPredicted RBP30.89■■■□□ 2.54
RTN4R-201ENST00000043402 AGXT2Q9BYV1 514 aa30.89■■■□□ 2.54
RTN4R-201ENST00000043402 SCRN1Q12765 414 aa30.89■■■□□ 2.54
RTN4R-201ENST00000043402 FERMT3Q86UX7 667 aa30.89■■■□□ 2.54
RTN4R-201ENST00000043402 HELBQ8NG08 1087 aaPredicted RBP30.88■■■□□ 2.53
RTN4R-201ENST00000043402 UTP14AQ9BVJ6 771 aaKnown RBP30.88■■■□□ 2.53
RTN4R-201ENST00000043402 CICQ96RK0 1608 aaPredicted RBP30.88■■■□□ 2.53
RTN4R-201ENST00000043402 FGD1P98174 961 aa30.88■■■□□ 2.53
RTN4R-201ENST00000043402 PHKA1P46020 1223 aa30.87■■■□□ 2.53
RTN4R-201ENST00000043402 PPP1R9BQ96SB3 815 aa30.87■■■□□ 2.53
RTN4R-201ENST00000043402 MYO5AQ9Y4I1 1855 aaKnown RBP30.87■■■□□ 2.53
RTN4R-201ENST00000043402 FGFR2P21802 821 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 TPRNQ4KMQ1 711 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 CCDC102BQ68D86 513 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 FAM173BQ6P4H8 233 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 FGAP02671 866 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 APOBRQ0VD83 1088 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 SEC31BQ9NQW1 1179 aa30.86■■■□□ 2.53
RTN4R-201ENST00000043402 PFKFB2O60825 505 aa30.85■■■□□ 2.53
RTN4R-201ENST00000043402 CCDC173Q0VFZ6 552 aa30.85■■■□□ 2.53
RTN4R-201ENST00000043402 MROH5Q6ZUA9 1318 aa30.85■■■□□ 2.53
RTN4R-201ENST00000043402 CHST3Q7LGC8 479 aa30.85■■■□□ 2.53
RTN4R-201ENST00000043402 DDX60Q8IY21 1712 aaKnown RBP30.84■■■□□ 2.53
RTN4R-201ENST00000043402 PUM3Q15397 648 aaKnown RBP30.84■■■□□ 2.53
RTN4R-201ENST00000043402 PIH1D3Q9NQM4 214 aaKnown RBP30.84■■■□□ 2.53
RTN4R-201ENST00000043402 GPAA1O43292 621 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 ARID4AP29374 1257 aaPredicted RBP30.83■■■□□ 2.53
RTN4R-201ENST00000043402 ADD2P35612 726 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 PARP10Q53GL7 1025 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 LPIN2Q92539 896 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 SNAP23O00161 211 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 TOM1O60784 492 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 NTSR2O95665 410 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 HAND2P61296 217 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 SMARCC2Q8TAQ2 1214 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.83■■■□□ 2.53
RTN4R-201ENST00000043402 CTNNA3Q9UI47 895 aa30.83■■■□□ 2.53
RTN4R-201ENST00000043402 NIP7Q9Y221 180 aaKnown RBP eCLIP30.83■■■□□ 2.53
RTN4R-201ENST00000043402 FAM98CQ17RN3 349 aaKnown RBP30.82■■■□□ 2.52
RTN4R-201ENST00000043402 CSPP1Q1MSJ5 1256 aa30.82■■■□□ 2.52
RTN4R-201ENST00000043402 SLC9C2Q5TAH2 1124 aa30.82■■■□□ 2.52
RTN4R-201ENST00000043402 SMARCC1Q92922 1105 aaPredicted RBP30.81■■■□□ 2.52
RTN4R-201ENST00000043402 DDX11Q96FC9 970 aa30.81■■■□□ 2.52
RTN4R-201ENST00000043402 COL5A3P25940 1745 aaPredicted RBP30.81■■■□□ 2.52
RTN4R-201ENST00000043402 CTDNEP1O95476 244 aa30.81■■■□□ 2.52
RTN4R-201ENST00000043402 TTF1Q15361 905 aaPredicted RBP30.81■■■□□ 2.52
RTN4R-201ENST00000043402 IMMTQ16891 758 aaKnown RBP30.81■■■□□ 2.52
RTN4R-201ENST00000043402 CCDC183Q5T5S1 534 aa30.81■■■□□ 2.52
RTN4R-201ENST00000043402 TTC6Q86TZ1 520 aa30.81■■■□□ 2.52
RTN4R-201ENST00000043402 ANP32BQ92688 251 aaKnown RBP30.81■■■□□ 2.52
RTN4R-201ENST00000043402 ARAP2Q8WZ64 1704 aa30.8■■■□□ 2.52
RTN4R-201ENST00000043402 NSUN7Q8NE18 718 aaKnown RBP30.8■■■□□ 2.52
RTN4R-201ENST00000043402 PHF14O94880 888 aa30.79■■■□□ 2.52
RTN4R-201ENST00000043402 KRT85P78386 507 aa30.79■■■□□ 2.52
RTN4R-201ENST00000043402 LLPHQ9BRT6 129 aaKnown RBP30.79■■■□□ 2.52
RTN4R-201ENST00000043402 TSPY26PQ9H489 355 aa30.79■■■□□ 2.52
RTN4R-201ENST00000043402 MPHOSPH8Q99549 860 aa30.79■■■□□ 2.52
RTN4R-201ENST00000043402 IDH1O75874 414 aaKnown RBP30.78■■■□□ 2.52
RTN4R-201ENST00000043402 UQCRFS1P1P0C7P4 283 aa30.78■■■□□ 2.52
RTN4R-201ENST00000043402 ZSCAN25Q6NSZ9 544 aa30.78■■■□□ 2.52
RTN4R-201ENST00000043402 CCT2P78371 535 aaKnown RBP30.78■■■□□ 2.52
RTN4R-201ENST00000043402 FBXL16Q8N461 479 aa30.78■■■□□ 2.52
RTN4R-201ENST00000043402 RNF214Q8ND24 703 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms