RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Trpv1Q704Y3 839 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Sv2bQ8BG39 683 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Lman1lQ8VCD3 505 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Sirt2Q8VDQ8 389 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Rnf181Q9CY62 165 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Arih1Q9Z1K5 555 aa10.29□□□□□ -0.76
Trim40-203ENSMUST00000172711 Gm6268A2A3U9 297 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Wdr66E9Q743 1299 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Wnt10bP48614 389 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Adam39Q7M762 756 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Slc44a4Q91VA1 707 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Htra3Q9D236 459 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Speer4f1Q9D5Q6 258 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Ddx20Q9JJY4 825 aaKnown RBP10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Sh3bp5Q9Z131 463 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Mageb2A2AHM0 380 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Snrpa1P57784 255 aaKnown RBP10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Ttll12Q3UDE2 639 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Slc38a10Q5I012 1090 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Slain1Q68FF7 579 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Ofd1Q80Z25 1017 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Sp8Q8BMJ8 486 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Snap47Q8R570 413 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Trim26Q99PN3 545 aa10.28□□□□□ -0.76
Trim40-203ENSMUST00000172711 Cfap44E9Q5M6 1843 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Casp1P29452 402 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Akap4Q60662 849 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Ddx31Q6NZQ2 687 aaKnown RBP10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Bend3Q6PAL0 825 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Epc2Q8C0I4 808 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Rtp1Q8C8C1 263 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 CrebzfQ91ZR3 358 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 RragcQ99K70 398 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Sh3bp5lQ99LH9 392 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 EhhadhQ9DBM2 718 aa10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Gtf2iQ9ESZ8 998 aaKnown RBP10.27□□□□□ -0.77
Trim40-203ENSMUST00000172711 Brca1P48754 1812 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Col3a1P08121 1464 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Bin2D3Z6Q9 489 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Pde4aO89084 844 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Prkg1P0C605 671 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Slc10a4Q3UEZ8 437 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 EspnlQ3UYR4 1005 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Mrs2Q5NCE8 434 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Nell2Q61220 819 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Rad21Q61550 635 aaKnown RBP10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Fchsd1Q6PFY1 688 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Znf18Q810A1 556 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Slc4a7Q8BTY2 1034 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 KarsQ99MN1 595 aaKnown RBP10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Zcchc17Q9ESX4 241 aaKnown RBP10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 Dicer1Q8R418 1916 aa10.26□□□□□ -0.77
Trim40-203ENSMUST00000172711 ChgaP26339 463 aaKnown RBP10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 Ksr2Q3UVC0 959 aa10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 HellsQ60848 821 aa10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 LdhdQ7TNG8 484 aa10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 Kbtbd13Q8C828 458 aa10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 Osbpl5Q9ER64 874 aa10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 Myh15E9Q264 1925 aa10.25□□□□□ -0.77
Trim40-203ENSMUST00000172711 HttP42859 3119 aa10.24□□□□□ -0.77
Trim40-203ENSMUST00000172711 Clcn6O35454 870 aa10.24□□□□□ -0.77
Trim40-203ENSMUST00000172711 Nectin2P32507 530 aa10.24□□□□□ -0.77
Trim40-203ENSMUST00000172711 Acsl1P41216 699 aa10.24□□□□□ -0.77
Trim40-203ENSMUST00000172711 Tmem143Q8VD26 458 aa10.24□□□□□ -0.77
Trim40-203ENSMUST00000172711 Cfdp1O88271 295 aaKnown RBP10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Gpr182P43142 395 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Sox10Q04888 466 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Rassf10Q8BL43 508 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 H2-Q4Q8HWB2 354 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Myh4Q5SX39 1939 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Grm8P47743 908 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Clul1Q3ZRW6 464 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Krt74Q6IFZ9 495 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Bcs1lQ9CZP5 418 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Tgm5Q9D7I9 724 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 B3galt4Q9Z0F0 371 aa10.23□□□□□ -0.77
Trim40-203ENSMUST00000172711 Chd5A2A8L1 1946 aa10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Sik3Q6P4S6 1311 aa10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Nova2D3YVV7 556 aaKnown RBP10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Ifi207E9Q3L4 978 aa10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Slc10a5Q5PT54 434 aa10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Nol10Q5RJG1 687 aaKnown RBP10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Ncoa5Q91W39 579 aaKnown RBP10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Pip4p2Q9CZX7 257 aa10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 S1pr4Q9Z0L1 386 aa10.22□□□□□ -0.77
Trim40-203ENSMUST00000172711 Ccdc88aQ5SNZ0 1873 aa10.21□□□□□ -0.77
Trim40-203ENSMUST00000172711 Fgl2P12804 432 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Ly6dP35459 127 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Rhbdl3P58873 404 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Trmt1Q3TX08 663 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Q3UK37 420 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Cyp4f37Q3V1F1 546 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Gnat3Q3V3I2 354 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 GpkowQ56A08 488 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Secisbp2lQ6A098 1086 aaKnown RBP10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Rab3gap1Q80UJ7 981 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Glrx3Q9CQM9 337 aa10.21□□□□□ -0.78
Trim40-203ENSMUST00000172711 Serpinb2P12388 415 aa10.2□□□□□ -0.78
Trim40-203ENSMUST00000172711 GabrdP22933 449 aa10.2□□□□□ -0.78
Trim40-203ENSMUST00000172711 VgfQ0VGU4 617 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms