RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Scaf8Q6DID3 1268 aa15.08■□□□□ 0
Trim50-202ENSMUST00000111180 Znf219Q6IQX8 726 aa15.08■□□□□ 0
Trim50-202ENSMUST00000111180 HlfQ8BW74 295 aa15.08■□□□□ 0
Trim50-202ENSMUST00000111180 Eif2s2Q99L45 331 aaKnown RBP15.08■□□□□ 0
Trim50-202ENSMUST00000111180 Ak7Q9D2H2 614 aa15.08■□□□□ 0
Trim50-202ENSMUST00000111180 Nek4Q9Z1J2 792 aa15.08■□□□□ 0
Trim50-202ENSMUST00000111180 Lgr5Q9Z1P4 907 aa15.08■□□□□ 0
Trim50-202ENSMUST00000111180 Gpr182P43142 395 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Plbd2Q3TCN2 594 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Psmd1Q3TXS7 953 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Tbc1d9Q3UYK3 1264 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Fam228bQ497Q6 232 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Micall1Q8BGT6 870 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Slc51aQ8R000 340 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 RestQ8VIG1 1082 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Ncoa5Q91W39 579 aaKnown RBP15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Taf5lQ91WQ5 589 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 CpvlQ9D3S9 478 aa15.07■□□□□ 0
Trim50-202ENSMUST00000111180 Map3k15A2AQW0 1331 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Nphp3Q7TNH6 1325 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Btaf1E9QAE3 1848 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Ube4aE9Q735 1028 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Nkx1-2P42580 305 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 DbnlQ62418 436 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Nlgn2Q69ZK9 836 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Skor1Q8BX46 964 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Tmem266Q8BZB3 538 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Q9D2X8 372 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Ly6iQ9WU67 134 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Scn9aQ62205 1984 aa15.06■□□□□ 0
Trim50-202ENSMUST00000111180 Mical3Q8CJ19 1993 aa15.05■□□□□ -0
Trim50-202ENSMUST00000111180 VegfbP49766 207 aa15.05■□□□□ -0
Trim50-202ENSMUST00000111180 Zkscan8Q8BSL0 588 aa15.05■□□□□ -0
Trim50-202ENSMUST00000111180 Thsd7bQ6P4U0 1607 aa15.04■□□□□ -0
Trim50-202ENSMUST00000111180 1700029H14RikE9PY36 240 aa15.04■□□□□ -0
Trim50-202ENSMUST00000111180 Ddx46Q569Z5 1032 aaKnown RBP15.04■□□□□ -0
Trim50-202ENSMUST00000111180 Mfap1aC0HKD8 439 aaKnown RBP15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Mfap1bC0HKD9 439 aaKnown RBP15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Magea8O89012 320 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 GmpsQ3THK7 693 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Ell2Q3UKU1 639 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Best3Q6H1V1 669 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Asap2Q7SIG6 958 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 4930504O13RikQ8C5Z9 145 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Angel2Q8K1C0 544 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Tspoap1Q7TNF8 1846 aa15.03■□□□□ -0
Trim50-202ENSMUST00000111180 Bin2D3Z6Q9 489 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Pde8bE9Q4S1 865 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Anxa1P10107 346 aaKnown RBP15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Pdia3P27773 505 aaKnown RBP15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Celf1P28659 486 aaKnown RBP15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Atp2b3Q0VF55 1220 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Llgl2Q3TJ91 1027 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Brf1Q8CFK2 676 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 McamQ8R2Y2 648 aaKnown RBP15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Fbxo33Q8VE08 562 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Sytl4Q9R0Q1 673 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Slfn1Q9Z0I7 337 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Heg1E9Q7X6 1337 aa15.02■□□□□ -0
Trim50-202ENSMUST00000111180 Speer4dL7N216 212 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Nucb1Q02819 459 aaKnown RBP15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Pdzrn3Q69ZS0 1063 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Ift57Q8BXG3 429 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Ppp6r3Q922D4 844 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Riok1Q922Q2 567 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Ppil4Q9CXG3 492 aaKnown RBP15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Pappa2E9PZ87 1789 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 TsksO54887 585 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Hsp90b1P08113 802 aaKnown RBP15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 IntuQ059U7 942 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Ptrh1Q8BW00 204 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Krt25Q8VCW2 446 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Tmem143Q8VD26 458 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Kcnq5Q9JK45 933 aa15.01□□□□□ -0.01
Trim50-202ENSMUST00000111180 Trpm7Q923J1 1863 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Timm10P62073 90 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Plekhf1Q3TB82 279 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Kiaa0753Q6A000 959 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Rab3gap1Q80UJ7 981 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Slc39a11Q8BWY7 342 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Slc14a2Q8R4T9 930 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Ltn1Q6A009 1767 aa15□□□□□ -0.01
Trim50-202ENSMUST00000111180 Psmd14O35593 310 aa14.99□□□□□ -0.01
Trim50-202ENSMUST00000111180 GabrdP22933 449 aa14.99□□□□□ -0.01
Trim50-202ENSMUST00000111180 Fam160b2Q80YR2 744 aa14.99□□□□□ -0.01
Trim50-202ENSMUST00000111180 Rbbp8nlA2ABX0 614 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Sept1P42209 366 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Il15P48346 162 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Cnot7Q60809 285 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Tor1aip2Q8BYU6 502 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Rdm1Q9CQK3 281 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Il1rapl2Q9ERS6 686 aa14.98□□□□□ -0.01
Trim50-202ENSMUST00000111180 Znfx1Q8R151 1909 aaKnown RBP14.97□□□□□ -0.01
Trim50-202ENSMUST00000111180 WasP70315 520 aa14.97□□□□□ -0.01
Trim50-202ENSMUST00000111180 NyxP83503 476 aa14.97□□□□□ -0.01
Trim50-202ENSMUST00000111180 Stk3Q9JI10 497 aa14.97□□□□□ -0.01
Trim50-202ENSMUST00000111180 Sh3bp5Q9Z131 463 aa14.97□□□□□ -0.01
Trim50-202ENSMUST00000111180 Nup98Q6PFD9 1816 aaKnown RBP14.97□□□□□ -0.01
Trim50-202ENSMUST00000111180 Carmil3Q3UFQ8 1375 aa14.96□□□□□ -0.01
Trim50-202ENSMUST00000111180 Npc1l1Q6T3U4 1333 aa14.96□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms