RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Sept9Q80UG5 583 aa37.17■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Fam160b2Q80YR2 744 aa37.17■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Bcar3Q9QZK2 820 aa37.17■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Ly6iQ9WU67 134 aa37.17■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Taf5lQ91WQ5 589 aa37.16■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Prl3d1P18121 224 aa37.15■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Terf1P70371 421 aa37.15■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Glis3Q6XP49 780 aa37.15■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Myh15E9Q264 1925 aa37.15■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Akap2O54931 893 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 XpcP51612 930 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 AaasP58742 546 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Fam84aQ9D650 292 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Zbtb45Q52KG4 520 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Ptpdc1Q6NZK8 747 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Ppil4Q9CXG3 492 aaKnown RBP37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Rbm33Q9CXK9 1231 aaKnown RBP37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Trmt44Q9D2Q2 713 aa37.14■■■■□ 3.54
Ctdnep1-201ENSMUST00000108593 Erc2Q6PH08 957 aa37.13■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Znf428Q8C1M2 176 aa37.13■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Mtmr2Q9Z2D1 643 aa37.13■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Letm1Q9Z2I0 738 aa37.13■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Noc3lQ8VI84 807 aaKnown RBP37.12■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Myh4Q5SX39 1939 aa37.11■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 TnksQ6PFX9 1320 aa37.11■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Rbbp6P97868 1790 aaKnown RBP37.11■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Znf18Q810A1 556 aa37.1■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Chmp5Q9D7S9 219 aa37.1■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Glt1d1A4FUP9 346 aa37.09■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Vps54Q5SPW0 977 aa37.09■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Scn9aQ62205 1984 aa37.08■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Kifc2O08672 792 aa37.08■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Slc7a3P70423 618 aa37.08■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Nol8Q3UHX0 1147 aaKnown RBP37.08■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Ube3bQ9ES34 1070 aa37.08■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Cyp3a57D3YYZ0 503 aa37.07■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 ZyxQ62523 564 aa37.07■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Gtf2iQ9ESZ8 998 aaKnown RBP37.07■■■■□ 3.53
Ctdnep1-201ENSMUST00000108593 Prl7d1P04769 244 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Ppp1r21Q3TDD9 780 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 EspnlQ3UYR4 1005 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Pram1Q6BCL1 675 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Nme8Q715T0 586 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Rdm1Q9CQK3 281 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Glrx3Q9CQM9 337 aa37.07■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Lrch1P62046 709 aa37.06■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Map9Q3TRR0 646 aa37.06■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Rbm15bQ6PHZ5 887 aaKnown RBP37.06■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Tor1aip2Q8BYU6 502 aa37.06■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Arfgef1G3X9K3 1846 aaKnown RBP37.06■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Fam83bQ0VBM2 1012 aa37.05■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Ddx31Q6NZQ2 687 aaKnown RBP37.05■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 CpdO89001 1377 aa37.05■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Mapkapk5O54992 473 aa37.04■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Kif22Q3V300 660 aa37.04■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Slc44a4Q91VA1 707 aa37.04■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Polr3dQ91WD1 398 aa37.04■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Usp48Q3V0C5 1052 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Rhot2Q8JZN7 620 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Kif18aQ91WD7 886 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Stk32bQ9JJX8 414 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Col1a1P11087 1453 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Zkscan2G3X952 960 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Eif6O55135 245 aa37.03■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Ccdc93Q7TQK5 629 aa37.02■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Psme4Q5SSW2 1843 aa37.01■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Rbbp8nlA2ABX0 614 aa37.01■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Mroh6V9GX81 722 aa37.01■■■■□ 3.52
Ctdnep1-201ENSMUST00000108593 Tuft1O08970 390 aa37■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Hmox1P14901 289 aa37■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Dbr1Q923B1 550 aa37■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 RarsQ9D0I9 660 aaKnown RBP37■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 NpcdF8VQB8 469 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Psmd14O35593 310 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Ube3cQ80U95 1083 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Stag1Q9D3E6 1258 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Wdr63B2RY71 923 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Ppef1O35655 650 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Ltv1Q6NSQ7 470 aaKnown RBP36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Il1rapl2Q9ERS6 686 aa36.99■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Stat5bP42232 786 aa36.98■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Gm2163Q6PCY5 473 aa36.98■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Map7O88735 730 aa36.97■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Golim4Q8BXA1 655 aa36.97■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Pnmal2G3X9N3 661 aa36.96■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Ifi207E9Q3L4 978 aa36.96■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 NsmfQ99NF2 532 aa36.96■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Tom1l2Q5SRX1 507 aa36.95■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Brf1Q8CFK2 676 aa36.95■■■■□ 3.51
Ctdnep1-201ENSMUST00000108593 Pde3bQ61409 1100 aa36.94■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Nfe2l3Q9WTM4 660 aa36.94■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Il17raQ60943 864 aa36.93■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Tmem179Q8BHH9 233 aa36.93■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Slc4a3P16283 1227 aa36.92■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Klf15Q9EPW2 415 aa36.92■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Zfp646Q6NV66 1788 aa36.92■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Adgre1Q61549 931 aa36.92■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 B4galnt3Q6L8S8 986 aa36.92■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 Ppp4r3bQ922R5 820 aa36.91■■■■□ 3.5
Ctdnep1-201ENSMUST00000108593 KnstrnQ9D9Z1 312 aaKnown RBP36.91■■■■□ 3.5
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms