RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Stk3Q9JI10 497 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Sytl4Q9R0Q1 673 aa10.77□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ecm29Q6PDI5 1840 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 A0A1W2P7S8 802 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Cyp2c69E9PXC3 491 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 PnnO35691 725 aaKnown RBP10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Nkx1-2P42580 305 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Cyp2c40P56657 491 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Cdc5lQ6A068 802 aaKnown RBP10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Golim4Q8BXA1 655 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ptcd1Q8C2E4 695 aaKnown RBP10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ube3bQ9ES34 1070 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Nek4Q9Z1J2 792 aa10.76□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Trim30dE9PWL0 497 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Csrnp1P59054 583 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 CalcaP70160 136 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Tbc1d9Q3UYK3 1264 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 EspnlQ3UYR4 1005 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ddx46Q569Z5 1032 aaKnown RBP10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Sept9Q80UG5 583 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Col5a2Q3U962 1497 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Flt1P35969 1333 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ltv1Q6NSQ7 470 aaKnown RBP10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Fchsd1Q6PFY1 688 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Nme8Q715T0 586 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 B4galnt4Q766D5 1034 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Prune1Q8BIW1 454 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Npc1l1Q6T3U4 1333 aa10.75□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Prl7d1P04769 244 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Pdia3P27773 505 aaKnown RBP10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Slc7a3P70423 618 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Pram1Q6BCL1 675 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gpr101Q80T62 511 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Egfem1Q8C088 590 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ppp4r3bQ922R5 820 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Tbc1d8Q9Z1A9 1134 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Mroh6V9GX81 722 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Mast3Q3U214 1321 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Anapc15-psA0A140T8L6 141 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ccdc183A2AJB1 534 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Nolc1E9Q5C9 702 aaKnown RBP10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Spg7Q3ULF4 781 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Il17raQ60943 864 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Spire2Q8K1S6 718 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Slc51aQ8R000 340 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Rnaseh2aQ9CWY8 301 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Letm1Q9Z2I0 738 aa10.74□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Scn9aQ62205 1984 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 D830030K20RikE9PYQ5 218 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm3043K7N693 218 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm16440K7N6G6 218 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm2244L7N2A3 218 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm3278L7N2D2 218 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Gm8271L7N2E2 218 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ppp1r21Q3TDD9 780 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Rbm15bQ6PHZ5 887 aaKnown RBP10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Skor1Q8BX46 964 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Plekhg6Q8R0J1 787 aa10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Dpf2Q61103 391 aaKnown RBP10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Rbm33Q9CXK9 1231 aaKnown RBP10.73□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Anp32aO35381 247 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Mapkapk5O54992 473 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Fam83bQ0VBM2 1012 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 NpeppsQ11011 920 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ube3cQ80U95 1083 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 FktnQ8R507 461 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 SnrkQ8VDU5 748 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Ppp6r3Q922D4 844 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Trmt44Q9D2Q2 713 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Myh6Q02566 1938 aaKnown RBP10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 CpdO89001 1377 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Tuft1O08970 390 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Hsp90b1P08113 802 aaKnown RBP10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Nucb1Q02819 459 aaKnown RBP10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 ArsiQ32KI9 573 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Map10Q8BJS7 891 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Bmp2kQ91Z96 1138 aa10.72□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Stat5bP42232 786 aa10.71□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Terf1P70371 421 aa10.71□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Pla2g4fQ50L41 855 aa10.71□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 FliiQ9JJ28 1271 aa10.71□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Pde3aQ9Z0X4 1141 aa10.71□□□□□ -0.69
Ccdc28a-201ENSMUST00000052648 Usp17lbE9Q9U0 468 aa10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Kif22Q3V300 660 aa10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Nell2Q61220 819 aa10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 XpcP51612 930 aa10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Map3k9Q3U1V8 1077 aa10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Thrap3Q569Z6 951 aaKnown RBP10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 RarsQ9D0I9 660 aaKnown RBP10.7□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Ppfia1B2RXQ2 1266 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Eddm13E9Q7F5 164 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Mdm2P23804 489 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Pdzrn3Q69ZS0 1063 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Edrf1Q6GQV7 1239 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Znf18Q810A1 556 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Slc44a4Q91VA1 707 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Mtmr2Q9Z2D1 643 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Kifc2O08672 792 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Ddx11Q6AXC6 880 aa10.69□□□□□ -0.7
Ccdc28a-201ENSMUST00000052648 Liat1Q810M6 228 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms