RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ms4a1P19437 291 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Panx2Q6IMP4 677 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Zbtb40Q6PCS8 1258 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Def6Q8C2K1 630 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 SetQ9EQU5 289 aaKnown RBP13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Exoc3l2D3YUP5 789 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Pfkfb1P70266 471 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gsdma2Q32M21 443 aa13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Dis3l2Q8CI75 870 aaKnown RBP13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Brd3Q8K2F0 726 aaKnown RBP13.01□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Atp10aO54827 1508 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ubn2Q80WC1 1314 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Metap2O08663 478 aaKnown RBP13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ovgp1Q62010 721 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tmem94Q7TSH8 1360 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Astn2Q80Z10 1352 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 MlecQ6ZQI3 291 aaKnown RBP13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ppm1eQ80TL0 749 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tmem87bQ8BKU8 555 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Epc1Q8C9X6 813 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Krt25Q8VCW2 446 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Trim11Q99PQ2 467 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 CenphQ9QYM8 241 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Rassf4Q8CB96 322 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Nop2Q922K7 793 aaKnown RBP13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Pex1Q5BL07 1284 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccp110Q7TSH4 1004 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Map3k11Q80XI6 850 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Clic6Q8BHB9 596 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Lmod1Q8BVA4 595 aa13□□□□□ -0.33
Topbp1-201ENSMUST00000035164 AcrbpQ3V140 540 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ncoa7Q6DFV7 943 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc39Q9D5Y1 937 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Zfyve16Q80U44 1528 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm21663A0A0G2JE01 267 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm7361D3Z6R1 267 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 5031410I06RikE9Q4E0 267 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm1979E9QAN3 267 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm5862K7N5V5 267 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm10220K7N660 267 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gnat3Q3V3I2 354 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tbc1d30Q69ZT9 766 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Trim56Q80VI1 734 aaKnown RBP12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Kcnq3Q8K3F6 873 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Znf131Q8K3J5 619 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Cnot6lQ8VEG6 555 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Pik3ap1Q9EQ32 811 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Golga5Q9QYE6 729 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Anks1aP59672 1150 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Fnbp4Q6ZQ03 1031 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc150Q8CDI7 1110 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Smc2Q8CG48 1191 aaKnown RBP12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Plekhg1F6S200 1446 aa12.99□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Prdm4Q80V63 803 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ubxn10Q8BG34 277 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Phf23Q8BSN5 401 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 ImmtQ8CAQ8 757 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Rbm19Q8R3C6 952 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Speer4bQ9D9F7 267 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Taf7Q9R1C0 341 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Synj2Q9D2G5 1434 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Dhx40Q6PE54 779 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Sec62Q8BU14 398 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ppfibp1Q8C8U0 969 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Lztfl1Q9JHQ5 299 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Hip1rQ9JKY5 1068 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 FancaQ9JL70 1439 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc191J3QQ27 883 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Smarcc1P97496 1104 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc129Q14B48 1034 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Klhl10Q9D5V2 608 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Odf2A3KGV1 830 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 TbcaP48428 108 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Specc1lQ2KN98 1118 aaKnown RBP12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Adck5Q80V03 582 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ppp2r2cQ8BG02 447 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc83Q9D4V3 305 aa12.98□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm21671G3UY31 267 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Lrrc6O88978 473 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 CebpaP53566 359 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 OptnQ8K3K8 584 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Adgrb3Q80ZF8 1522 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Myom1Q62234 1667 aaKnown RBP12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm156Q58A37 223 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Krt39Q6IFX4 482 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Smarcc2Q6PDG5 1213 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Ccdc181Q80ZU5 509 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 PdclQ9DBX2 301 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Hspd1P63038 573 aaKnown RBP12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Tubgcp2Q921G8 905 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Polr2dQ9D7M8 142 aaKnown RBP12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm21698A0A087WQP8 267 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Dhx8A2A4P0 1244 aaKnown RBP12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Msh6P54276 1358 aaKnown RBP12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Lrriq1Q0P5X1 1673 aa12.97□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Gm5624F6ZZG8 207 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Pde11aP0C1Q2 933 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Sycp1Q62209 993 aa12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Luc7l2Q7TNC4 392 aaKnown RBP12.96□□□□□ -0.33
Topbp1-201ENSMUST00000035164 Phldb2Q8K1N2 1249 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms