RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Rufy2Q8R4C2 606 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Appbp2Q9DAX9 585 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Wdr19Q3UGF1 1341 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Myh1Q5SX40 1942 aa14.97□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Il17raQ60943 864 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Fam160b2Q80YR2 744 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Zeb2Q9R0G7 1215 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Nfe2l3Q9WTM4 660 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Sall1Q9ER74 1322 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Gm29094F6Q785 221 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Hmx1O70218 332 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Anxa1P10107 346 aaKnown RBP14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Cct2P80314 535 aaKnown RBP14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Zbtb38Q3LR78 1197 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Mtmr3Q8K296 1196 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 MthfsQ9D110 203 aa14.96□□□□□ -0.01
Rnf4-201ENSMUST00000030992 Zkscan7E9PVW1 718 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Cops6O88545 324 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Atp2b3Q0VF55 1220 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 BcanQ61361 883 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ifit1Q64282 463 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Edrf1Q6GQV7 1239 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 TnmdQ9EP64 317 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Foxo4Q9WVH3 505 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Mast2Q60592 1734 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Brpf3B2KF05 1204 aaKnown RBP14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 EzrP26040 586 aaKnown RBP14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Cfap157Q0VFX2 523 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Pde4dQ01063 747 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Sik1Q60670 779 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Spty2d1Q68FG3 682 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Alg3Q8K2A8 438 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Nlrp3Q8R4B8 1033 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Zbtb1Q91VL9 713 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Mmel1Q9JLI3 765 aa14.95□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Znf692Q3U381 531 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Tmem59lQ7TNI2 337 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Fsd1Q7TPM6 496 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Rab3gap1Q80UJ7 981 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ift57Q8BXG3 429 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ube3bQ9ES34 1070 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Kansl3A2RSY1 903 aaKnown RBP14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ercc3P49135 783 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Bach1P97302 739 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Alx1Q8C8B0 326 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Plcd3Q8K2J0 785 aa14.94□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Vmn2r23E9PXI5 849 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Hap1O35668 628 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Cyp2d9P11714 504 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Cfap58B2RW38 873 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Sept1P42209 366 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Plekhf1Q3TB82 279 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Nlrp9aQ66X03 949 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Oxsr1Q6P9R2 527 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Jmjd4Q8BFT6 427 aa14.93□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Aox4Q3TYQ9 1336 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 ErmnQ5EBJ4 281 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Hand2Q61039 217 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Sptlc3Q8BG54 563 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Cfap44E9Q5M6 1843 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Mctp1E9PV86 951 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Pde8bE9Q4S1 865 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Gse1Q3U3C9 1213 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 TrhQ62361 256 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Fbxo3Q9DC63 480 aa14.92□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ccdc112A0AUP1 442 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Bin2D3Z6Q9 489 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Prl3d1P18121 224 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Slc38a10Q5I012 1090 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 ImmtQ8CAQ8 757 aaKnown RBP14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Bicd2Q921C5 820 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Riok1Q922Q2 567 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Emilin1Q99K41 1017 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Itga6Q61739 1091 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Snw1Q9CSN1 536 aaKnown RBP14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Pes1Q9EQ61 584 aaKnown RBP14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ripk4Q9ERK0 786 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Kat6bQ8BRB7 1872 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Plbd2Q3TCN2 594 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ccdc82Q6PG04 518 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Kcnq3Q8K3F6 873 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Adam1bQ8R534 806 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ginm1Q91WR6 327 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Osbpl5Q9ER64 874 aa14.91□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Setdb1O88974 1307 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 FosbP13346 338 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Kcnf1Q7TSH7 493 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Cdca8Q8BHX3 289 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 FAM186AQ9D9R9 1790 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Pcdhb9E9Q5G2 828 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Ppfia3P60469 1194 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Col4a3bpQ9EQG9 624 aa14.9□□□□□ -0.02
Rnf4-201ENSMUST00000030992 Prr5lA2AVJ5 370 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 LyarQ08288 388 aaKnown RBP14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cyp7a1Q64505 503 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Terf2ipQ91VL8 393 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Sh3bgrQ9WUZ7 214 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 4931408C20RikE9PWP9 1381 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cep63Q3UPP8 700 aa14.89□□□□□ -0.03
Rnf4-201ENSMUST00000030992 Cep55Q8BT07 462 aa14.89□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms