RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Nrbp1Q99J45 535 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Pik3ap1Q9EQ32 811 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Tecpr2Q3UH45 1423 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 A0A0U1RNP2 1173 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ftl2P49945 183 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ccdc162pQ0VG85 912 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 DbnlQ62418 436 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 U2af1l4Q8BGJ9 220 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Lonrf3Q9D4H7 753 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ndufa8Q9DCJ5 172 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Igbp1bQ9QZ29 343 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 CemipQ8BI06 1361 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Izumo3A6PWV3 263 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Prl7a2O54831 253 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Sde2Q8K1J5 448 aaKnown RBP12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Uhrf1bp1B2KF50 1429 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Gemin5Q8BX17 1502 aaKnown RBP12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Igsf1Q7TQA1 1317 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 TsksO54887 585 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Mapkapk5O54992 473 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Tmem119Q8R138 280 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Popdc2Q9ES82 367 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Irs4Q9Z0Y7 1216 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cyp2d11P24457 504 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Nlrp9aQ66X03 949 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Fchsd1Q6PFY1 688 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Znf653Q6YND2 615 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ttc12Q8BW49 704 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Syt10Q9R0N4 523 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Kif2aP28740 705 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Wdhd1P59328 1117 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Zmynd15Q8C0R7 736 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Rdm1Q9CQK3 281 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Zbtb43Q9DAI4 467 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Rad50P70388 1312 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Brpf3B2KF05 1204 aaKnown RBP12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Dnm1P39053 867 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Lrrc2Q8VDB8 371 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Foxo3Q9WVH4 672 aa12.56□□□□□ -0.4
Msh3-201ENSMUST00000022220 Prl3d2F6R3P9 224 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Snrpa1P57784 255 aaKnown RBP12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cdcp1Q5U462 833 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ankrd23Q812A3 306 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Bloc1s2Q9CWG9 143 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Galntl5Q9D4M9 431 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Dip2aQ8BWT5 1523 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Oxsr1Q6P9R2 527 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Smc2Q8CG48 1191 aaKnown RBP12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Hmg20bQ9Z104 317 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Metap2O08663 478 aaKnown RBP12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 MycnP03966 462 aaKnown RBP12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Utp18Q5SSI6 552 aaKnown RBP12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ano1Q8BHY3 960 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Taf5lQ91WQ5 589 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 MthfsQ9D110 203 aa12.55□□□□□ -0.4
Msh3-201ENSMUST00000022220 Wdr24Q8CFJ9 790 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Naa16Q9DBB4 864 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cwc15Q9JHS9 229 aaKnown RBP12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Pdcd11Q6NS46 1862 aaKnown RBP12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Mcm6P97311 821 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 LyarQ08288 388 aaKnown RBP12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Esyt1Q3U7R1 1092 aaKnown RBP12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Znf18Q810A1 556 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Myl6bQ8CI43 207 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Iqca1Q9CUL5 857 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cnpy2Q9QXT0 182 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Topbp1Q6ZQF0 1515 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cfap58B2RW38 873 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Zscan29E9Q5B4 869 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Zbtb38Q3LR78 1197 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Trim25Q61510 634 aaKnown RBP12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Tpm4Q6IRU2 248 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 E4f1Q8CCE9 783 aa12.54□□□□□ -0.4
Msh3-201ENSMUST00000022220 Arhgef28P97433 1693 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ugt1a5B2RT14 529 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Uri1Q3TLD5 531 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cdkl5Q3UTQ8 938 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Lrrc43Q3V0L5 667 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Vps18Q8R307 973 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Dnaaf4Q8R368 420 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Kcnf1Q7TSH7 493 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Snw1Q9CSN1 536 aaKnown RBP12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 Mctp2Q5RJH2 878 aa12.53□□□□□ -0.4
Msh3-201ENSMUST00000022220 4930407I10RikD3Z5T8 1512 aa12.52□□□□□ -0.4
Msh3-201ENSMUST00000022220 Gpr182P43142 395 aa12.52□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ifit1Q64282 463 aa12.52□□□□□ -0.4
Msh3-201ENSMUST00000022220 Inpp5bQ8K337 993 aa12.52□□□□□ -0.4
Msh3-201ENSMUST00000022220 Mrpl44Q9CY73 333 aaKnown RBP12.52□□□□□ -0.4
Msh3-201ENSMUST00000022220 Homer1Q9Z2Y3 366 aa12.52□□□□□ -0.4
Msh3-201ENSMUST00000022220 Ttc37F8VPK0 1563 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Dip2bQ3UH60 1574 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 L1td1Q587J6 782 aaKnown RBP12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Igsf3Q6ZQA6 1194 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Ddx41Q91VN6 622 aaKnown RBP12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Jdp2P97875 163 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Pnpla2Q8BJ56 486 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Vps16Q920Q4 839 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Rufy3Q9D394 469 aa12.52□□□□□ -0.41
Msh3-201ENSMUST00000022220 Prr5lA2AVJ5 370 aa12.51□□□□□ -0.41
Msh3-201ENSMUST00000022220 Dennd3A2RT67 1274 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms