RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 SSC4DQ8WTU2 575 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 PCNPQ8WW12 178 aaKnown RBP14.89□□□□□ -0.03
PHGDH-229ENST00000641891 PNPLA2Q96AD5 504 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 ELMOD3Q96FG2 381 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 THOC3Q96J01 351 aaKnown RBP14.89□□□□□ -0.03
PHGDH-229ENST00000641891 IRF2BPLQ9H1B7 796 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 UPB1Q9UBR1 384 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 OPN4Q9UHM6 478 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 KCNK7Q9Y2U2 307 aa14.89□□□□□ -0.03
PHGDH-229ENST00000641891 OR14I1A6ND48 311 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 SLC22A5O76082 557 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 GDF1P27539 372 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 CYB561P49447 251 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 EXOSC2Q13868 293 aaKnown RBP14.88□□□□□ -0.03
PHGDH-229ENST00000641891 SNAI3Q3KNW1 292 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 PLAC9Q5JTB6 97 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 OR10D3Q8NH80 312 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 KCNE4Q8WWG9 221 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 MRGPRFQ96AM1 343 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 ALKBH3Q96Q83 286 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-229ENST00000641891 SLC25A21Q9BQT8 299 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-229ENST00000641891 CRLF2Q9HC73 371 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 ZNF107Q9UII5 783 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-229ENST00000641891 VSIG4Q9Y279 399 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 ZNF716A6NP11 495 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 M0R135 149 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 CD59P13987 128 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 HRH1P35367 487 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 RFC3P40938 356 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 DHODHQ02127 395 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 RNASE10Q5GAN6 216 aaKnown RBP14.88□□□□□ -0.03
PHGDH-229ENST00000641891 C1QL2Q7Z5L3 287 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 ZNF799Q96GE5 643 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 ADGRG7Q96K78 797 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 ZPBPQ9BS86 351 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 EDEM2Q9BV94 578 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 DDA1Q9BW61 102 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 SF3B5Q9BWJ5 86 aaKnown RBP14.88□□□□□ -0.03
PHGDH-229ENST00000641891 IFT46Q9NQC8 304 aa14.88□□□□□ -0.03
PHGDH-229ENST00000641891 F5H5P2 479 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 CRTAPO75718 401 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 PATE4P0C8F1 98 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 OTX1P32242 354 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 CASRP41180 1078 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 CXADRP78310 365 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 MRPS34P82930 218 aaKnown RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 UBE2V2Q15819 145 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 SFRP5Q5T4F7 317 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 OR2W3Q7Z3T1 314 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 INTS12Q96CB8 462 aaKnown RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 ZNF845Q96IR2 970 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 RADILQ96JH8 1075 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 TMEM59Q9BXS4 323 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 ALX4Q9H161 411 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 V9GYS6 101 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 DISC1C4P0D8 188 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 RAD51DO75771 328 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 DHRS3O75911 302 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 POU3F2P20265 443 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 CD96P40200 585 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 PRSS12P56730 875 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 HGFACQ04756 655 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 MEF2DQ14814 521 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 FAM27BQ5VT28 67 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 C11orf88Q6PI97 169 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 OR2V1Q8NHB1 315 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 CCDC107Q8WV48 283 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 CLEC4MQ9H2X3 399 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-229ENST00000641891 PIGLQ9Y2B2 252 aa14.87□□□□□ -0.03
PHGDH-229ENST00000641891 A0A0U1RQV5 110 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 H3BUI4 141 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 M0R233 179 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 CDX4O14627 284 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-229ENST00000641891 DNPH1O43598 174 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 PMP2P02689 132 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 B4GALT1P15291 398 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 DLSTP36957 453 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 TMEM50BP56557 158 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 FOXO1Q12778 655 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 OPCMLQ14982 345 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 KISS1Q15726 138 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 ZNF774Q6NX45 483 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 PLXDC2Q6UX71 529 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 AAED1Q7RTV5 226 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 NAXDQ8IW45 347 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 OR10K1Q8NGX5 313 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 KCNG3Q8TAE7 436 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 SIGLEC12Q96PQ1 595 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 HES7Q9BYE0 225 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 B3GNT2Q9NY97 397 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 ZNF224Q9NZL3 707 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 LRFN1Q9P244 771 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 DOCK10Q96BY6 2186 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 GPR179Q6PRD1 2367 aa14.86□□□□□ -0.03
PHGDH-229ENST00000641891 L7N2F9 121 aa14.85□□□□□ -0.03
PHGDH-229ENST00000641891 NOS1APO75052 506 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-229ENST00000641891 THBS4P35443 961 aa14.85□□□□□ -0.03
PHGDH-229ENST00000641891 ECH1Q13011 328 aa14.85□□□□□ -0.03
PHGDH-229ENST00000641891 ABLIM2Q6H8Q1 611 aa14.85□□□□□ -0.03
PHGDH-229ENST00000641891 C12orf45Q8N5I9 185 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms