RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	ISPD	A4D126	451 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	DLGAP1	O14490	977 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	IGHV4-31	P0DP07	118 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	GABRB1	P18505	474 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	GNAL	P38405	381 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	MMP16	P51512	607 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	IL5RA	Q01344	420 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	KRTAP1-1	Q07627	177 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	PLEKHG7	Q6ZR37	379 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	SSX6	Q7RTT6	188 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	DHRSX	Q8N5I4	330 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	CELF2-AS1	Q8N7Q2	184 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	SETD9	Q8NE22	299 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	OR8S1	Q8NH09	359 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	MRPL48	Q96GC5	212 aa	Known RBP	13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	PAPOLG	Q9BWT3	736 aa	Known RBP	13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	GCM1	Q9NP62	436 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	AASS	Q9UDR5	926 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	NUFIP1	Q9UHK0	495 aa	Known RBP	13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	MRM2	Q9UI43	246 aa	Known RBP	13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	WIPI2	Q9Y4P8	454 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039		R4GMQ9	66 aa		13.39	□□□□□ -0.27
SPIN3-233	ENST00000640039	DNHD1	Q96M86	4753 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	IGHV3-64D	A0A0J9YX35	117 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	DAPL1	A0PJW8	107 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	METTL15	A6NJ78	407 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	LRRC30	A6NM36	301 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	MAGEB4	O15481	346 aa	Predicted RBP	13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	SULT1C4	O75897	302 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	RPP14	O95059	124 aa	Known RBP	13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	IRF2	P14316	349 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	CD200	P41217	278 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	ZNF91	Q05481	1191 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	SLC34A1	Q06495	639 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	MFGE8	Q08431	387 aa	Predicted RBP	13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	OR8B8	Q15620	311 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	BCL2L15	Q5TBC7	163 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	MOGAT3	Q86VF5	341 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	CLDND2	Q8NHS1	167 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	RAB39B	Q96DA2	213 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	MYCBP	Q99417	103 aa	Predicted RBP	13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	GAL3ST1	Q99999	423 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	YAE1D1	Q9NRH1	226 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	OR52A1	Q9UKL2	312 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	RPL36	Q9Y3U8	105 aa	Known RBP	13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	SNX5	Q9Y5X3	404 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	NPTN	Q9Y639	398 aa		13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	YLPM1	P49750	1951 aa	Known RBP	13.38	□□□□□ -0.27
SPIN3-233	ENST00000640039	ABCA1	O95477	2261 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ANXA2P2	A6NMY6	339 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	DBT	P11182	482 aa	Known RBP	13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ZNF16	P17020	682 aa	Predicted RBP	13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	GATA4	P43694	442 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	MAP2K3	P46734	347 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	MAB21L1	Q13394	359 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	C6orf52	Q5T4I8	152 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ZNF691	Q5VV52	312 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	C1orf87	Q8N0U7	546 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ACBD7	Q8N6N7	88 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	OR11L1	Q8NGX0	322 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	DVL3	Q92997	716 aa	Predicted RBP	13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ITFG2	Q969R8	447 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ERGIC1	Q969X5	290 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	LYZL4	Q96KX0	146 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	SIGLEC11	Q96RL6	698 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	RNPEPL1	Q9HAU8	725 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ABCB9	Q9NP78	766 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	C14orf119	Q9NWQ9	140 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	GNG8	Q9UK08	70 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	ZAN	Q9Y493	2812 aa		13.37	□□□□□ -0.27
SPIN3-233	ENST00000640039	LOC100289279	A0A1B0GTE1	492 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039		A6NLC8	198 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039		A8MV72	311 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	WNT9B	O14905	357 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	MTRF1	O75570	445 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	CLIC3	O95833	236 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	FADS2	O95864	444 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	PNP	P00491	289 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	ATP6V1B1	P15313	513 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	IL2RG	P31785	369 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	CAPG	P40121	348 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	CDH15	P55291	814 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	ZNF85	Q03923	595 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	IL18R1	Q13478	541 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	PRAMEF6	Q5VXH4	476 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	LIPN	Q5VXI9	398 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	FAM166A	Q6J272	317 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	THAP5	Q7Z6K1	395 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	LINC01356	Q8N9X3	169 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	OR51E1	Q8TCB6	317 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	MSI2	Q96DH6	328 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	LGALS12	Q96DT0	336 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	ADI1	Q9BV57	179 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	FN3KRP	Q9HA64	309 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	AMBN	Q9NP70	447 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	GPR84	Q9NQS5	396 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	UFSP2	Q9NUQ7	469 aa		13.36	□□□□□ -0.27
SPIN3-233	ENST00000640039	DCAF16	Q9NXF7	216 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms