RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TMEM59Q9BXS4 323 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 ESM1Q9NQ30 184 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 SLC25A37Q9NYZ2 338 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 DUX4Q9UBX2 424 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 UNC13CQ8NB66 2214 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 USP9YO00507 2555 aaPredicted RBP6.09□□□□□ -1.43
NECAP1-220ENST00000639841 MGAQ8IWI9 3026 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 A0A1B0GTH9 108 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 SLC1A7O00341 560 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 PRKYO43930 277 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 IFNA5P01569 189 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 FRMD6-AS1P0C7T7 363 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 GPD1P21695 349 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 RFC3P40938 356 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 MAGEA3P43357 314 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 YAP1P46937 504 aaKnown RBP6.09□□□□□ -1.43
NECAP1-220ENST00000639841 PRKXP51817 358 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 LIM2P55344 173 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 LINC00310P59036 64 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 ABCE1P61221 599 aaKnown RBP6.09□□□□□ -1.43
NECAP1-220ENST00000639841 DPYSL3Q14195 570 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 GGTLC2Q14390 218 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.09□□□□□ -1.43
NECAP1-220ENST00000639841 OR8G2PQ6IF36 304 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 CMC1Q7Z7K0 106 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 OR6K2Q8NGY2 324 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 DTD1Q8TEA8 209 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 IP6K3Q96PC2 410 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 MS4A4EQ96PG1 132 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 TBX15Q96SF7 602 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 TRIM51Q9BSJ1 452 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 NAT10Q9H0A0 1025 aaKnown RBP6.09□□□□□ -1.43
NECAP1-220ENST00000639841 ARMC7Q9H6L4 198 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 PDFQ9HBH1 243 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 CLN6Q9NWW5 311 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 HRASLS2Q9NWW9 162 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 TEX10Q9NXF1 929 aaPredicted RBP6.09□□□□□ -1.43
NECAP1-220ENST00000639841 ZNHIT2Q9UHR6 403 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 TP53TG5Q9Y2B4 290 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 WIF1Q9Y5W5 379 aa6.09□□□□□ -1.43
NECAP1-220ENST00000639841 LOC400499M0QZD8 3231 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 FLNCQ14315 2725 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 GLYATL1P3A0A0U1RQE8 302 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 GOLGA6L19H0YKK7 550 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 ATP8B1O43520 1251 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 DENRO43583 198 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 CFL1P23528 166 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 CXCR2P25025 360 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 FOXN2P32314 431 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 FBXW4P57775 412 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 HILS1P60008 231 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 TPI1P60174 286 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 RPL26P61254 145 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 SLC35B1P78383 322 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 DHODHQ02127 395 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 SRSF6Q13247 344 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 GNMTQ14749 295 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 OXA1LQ15070 435 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 IGFBP7Q16270 282 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 THOC7Q6I9Y2 204 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 SSX6Q7RTT6 188 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 RXFP2Q8WXD0 754 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 SARAFQ96BY9 339 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 DGCR14Q96DF8 476 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 KLHDC3Q9BQ90 382 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 PLEKHA3Q9HB20 300 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF71Q9NQZ8 489 aaPredicted RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 PAK1IP1Q9NWT1 392 aaPredicted RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 THUMPD1Q9NXG2 353 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 CCDC59Q9P031 241 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 EIF3KQ9UBQ5 218 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 RPL26L1Q9UNX3 145 aaKnown RBP6.08□□□□□ -1.44
NECAP1-220ENST00000639841 NTNG1Q9Y2I2 539 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 UNC79Q9P2D8 2635 aa6.08□□□□□ -1.44
NECAP1-220ENST00000639841 RAMP1O60894 148 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 CEACAM4O75871 244 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 CLIC3O95833 236 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 SERPINA5P05154 406 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 RPL35AP18077 110 aaKnown RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZP3P21754 424 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 SOX3P41225 446 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF235Q14590 738 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF260Q3ZCT1 412 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ARTNQ5T4W7 220 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF425Q6IV72 752 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 COX15Q7KZN9 410 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 PRELID2Q8N945 189 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 FAM172AQ8WUF8 416 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 OR5P2Q8WZ92 322 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 GTF3AQ92664 365 aaKnown RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 CREB3L1Q96BA8 519 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 CABLES2Q9BTV7 478 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 RBKSQ9H477 322 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 HRASLSQ9HDD0 168 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ELOVL5Q9NYP7 299 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 TAS2R16Q9NYV7 291 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 NEU3Q9UQ49 428 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 POLR3HQ9Y535 204 aaPredicted RBP6.07□□□□□ -1.44
NECAP1-220ENST00000639841 SNX10Q9Y5X0 201 aa6.07□□□□□ -1.44
NECAP1-220ENST00000639841 ZNF106Q9H2Y7 1883 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms