RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 EDDM3BP56851 147 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 RAB31Q13636 194 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 ANKRD37Q7Z713 158 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 LYG2Q86SG7 212 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 ST7LQ8TDW4 575 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 KCNJ15Q99712 375 aa12.91□□□□□ -0.34
SCARB2-216ENST00000639300 EXOSC3Q9NQT5 275 aaKnown RBP12.91□□□□□ -0.34
SCARB2-216ENST00000639300 TMEM272A0A1B0GTI8 110 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 ERGP11308 486 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 LRRTM1Q86UE6 522 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 OR2AE1Q8NHA4 323 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 ZPLD1Q8TCW7 415 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 MED30Q96HR3 178 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 XRCC2O43543 280 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 IGKV1D-16P01601 117 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 SEMG1P04279 462 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 CHATP28329 748 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 NKX2-1P43699 371 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-216ENST00000639300 CASP6P55212 293 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 UBE2KP61086 200 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 C20orf196Q8IYI0 205 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 PTPMT1Q8WUK0 201 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-216ENST00000639300 C20orf24Q9BUV8 137 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 SUCNR1Q9BXA5 334 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
SCARB2-216ENST00000639300 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 GSTP1P09211 210 aaKnown RBP12.9□□□□□ -0.34
SCARB2-216ENST00000639300 EIF2S3P41091 472 aaKnown RBP12.9□□□□□ -0.34
SCARB2-216ENST00000639300 SRPXP78539 464 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 CATR1Q13166 79 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 TFAP2EQ6VUC0 442 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 DMBX1Q8NFW5 382 aa12.9□□□□□ -0.34
SCARB2-216ENST00000639300 TTLL8A6PVC2 850 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 FAM157BP0CG42 384 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 FZD5Q13467 585 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 PDLIM3Q53GG5 364 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-216ENST00000639300 BAP18Q8IXM2 172 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 OR13C8Q8NGS7 320 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM68Q96MH6 324 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 PIGMQ9H3S5 423 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 DLL4Q9NR61 685 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ZNF230Q9UIE0 474 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ACACAQ13085 2346 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 HPXP02790 462 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 IL5P05113 134 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 HAAOP46952 286 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 SP6Q3SY56 376 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 CDH26Q8IXH8 852 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 PLA2G3Q9NZ20 509 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-216ENST00000639300 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 CD96P40200 585 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 KIR2DS4P43632 304 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 CRYBA2P53672 197 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 KIR2DS1Q14954 304 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-216ENST00000639300 RHBDD2Q6NTF9 364 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ST8SIA2Q92186 375 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 SSX3Q99909 188 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 DHRS2Q13268 280 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 KISS1Q15726 138 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 GALNT16Q8N428 558 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 SFT2D1Q8WV19 159 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 TCTEX1D2Q8WW35 142 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 MCHR2Q969V1 340 aa12.89□□□□□ -0.35
SCARB2-216ENST00000639300 LCTP09848 1927 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 SERPINA7P05543 415 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 IL9P15248 144 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 PIGPP57054 158 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 OR8G2PQ6IF36 304 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 ADGRG3Q86Y34 549 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 FBLIM1Q8WUP2 373 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 FOXB1Q99853 325 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 MAGT1Q9H0U3 335 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 PILRAQ9UKJ1 303 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 LSM2Q9Y333 95 aaKnown RBP12.88□□□□□ -0.35
SCARB2-216ENST00000639300 NME2P1O60361 137 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 LRP3O75074 770 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 TGM6O95932 706 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 CTSBP07858 339 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 BRICD5Q6PL45 260 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 SLC30A7Q8NEW0 376 aa12.88□□□□□ -0.35
SCARB2-216ENST00000639300 OR10J5Q8NHC4 309 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms