RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 RERGQ96A58 199 aaPredicted RBP1□□□□□ -2.25
CCDC7-211ENST00000638889 IGF2BP2-AS1Q96M15 143 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 CSPG4P5Q96PW8 444 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 CENPKQ9BS16 269 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 METTL7AQ9H8H3 244 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 RGS18Q9NS28 235 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 SLC39A1Q9NY26 324 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 CLN8Q9UBY8 286 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 HES2Q9Y543 173 aa1□□□□□ -2.25
CCDC7-211ENST00000638889 BAHCC1Q9P281 2608 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 TRBV9A0A0B4J1U6 114 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 ISPDA4D126 451 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 M0R1X1 148 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 OVOL1O14753 267 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 FGFR1OPO95684 399 aaKnown RBP0.99□□□□□ -2.25
CCDC7-211ENST00000638889 IGHG2P01859 326 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 PGA4P0DJD7 388 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 PGA3P0DJD8 388 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 ARL14EPLP0DKL9 152 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 PBLDP30039 288 aaPredicted RBP0.99□□□□□ -2.25
CCDC7-211ENST00000638889 MPIP34949 423 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 ZNF678Q5SXM1 525 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 ZNF660Q6AZW8 331 aaPredicted RBP0.99□□□□□ -2.25
CCDC7-211ENST00000638889 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 Q6ZSR6 202 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 SLC25A29Q8N8R3 303 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 OR4A4PQ8NGN8 299 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 OR4C13Q8NGP0 309 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 OR5K2Q8NHB8 316 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 ACTL9Q8TC94 416 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 ABCG5Q9H222 651 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 DSN1Q9H410 356 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 TMEM38AQ9H6F2 299 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 RETNQ9HD89 108 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 VWDEQ8N2E2 1590 aa0.99□□□□□ -2.25
CCDC7-211ENST00000638889 BAZ2AQ9UIF9 1905 aaKnown RBP0.98□□□□□ -2.25
CCDC7-211ENST00000638889 IGKV1-6A0A0C4DH72 117 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 AP3B1O00203 1094 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 GABRPO00591 440 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 LSM8O95777 96 aaKnown RBP0.98□□□□□ -2.25
CCDC7-211ENST00000638889 IGKV1-39P01597 117 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 IGHV1-46P01743 117 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 MAS1P04201 325 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 IGKV1D-39P04432 117 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 RAB4AP20338 218 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 MYL9P24844 172 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 RRM2P31350 389 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 PFN2P35080 140 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 TAGLN2P37802 199 aaKnown RBP0.98□□□□□ -2.25
CCDC7-211ENST00000638889 RAB10P61026 200 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 LIPEQ05469 1076 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 NAB1Q13506 487 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 KRTAP21-3Q3LHN1 58 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 MFSD14CQ5VZR4 134 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 TMPRSS11AQ6ZMR5 421 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 TCF24Q7RTU0 167 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 BBS7Q8IWZ6 715 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 BPIFCQ8NFQ6 507 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 CDS1Q92903 461 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 FBXO32Q969P5 355 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 ZNF649Q9BS31 505 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 PIGUQ9H490 435 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 TMEM165Q9HC07 324 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 RBFOX1Q9NWB1 397 aaKnown RBP0.98□□□□□ -2.25
CCDC7-211ENST00000638889 SSH2Q76I76 1423 aa0.98□□□□□ -2.25
CCDC7-211ENST00000638889 PRR14LQ5THK1 2151 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 CCL15-CCL14A0A0B4J2E2 113 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 D6RAR5 112 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 H7C0C1 242 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 NME4O00746 187 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 SLC9A3R1O14745 358 aaPredicted RBP0.97□□□□□ -2.25
CCDC7-211ENST00000638889 CCDC22O60826 627 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 PRB1P04280 392 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 APLNRP35414 380 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 GGT2P36268 569 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 MYCNOSP40205 109 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 ATP5OP48047 213 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 KLF3P57682 345 aaPredicted RBP0.97□□□□□ -2.25
CCDC7-211ENST00000638889 ACTR3P61158 418 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 CCL15Q16663 113 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 XKR7Q5GH72 579 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 FAM104BQ5XKR9 115 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 TTC23LQ6PF05 361 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 OR10W1Q8NGF6 305 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 OR13C2Q8NGS9 318 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 ZNF420Q8TAQ5 688 aaPredicted RBP0.97□□□□□ -2.25
CCDC7-211ENST00000638889 ELMO1Q92556 727 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 SGTBQ96EQ0 304 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 MS4A8Q9BY19 250 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 NT5C3AQ9H0P0 336 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 VSIRQ9H7M9 311 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 MRM3Q9HC36 420 aaKnown RBP0.97□□□□□ -2.25
CCDC7-211ENST00000638889 AGPAT4Q9NRZ5 378 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
CCDC7-211ENST00000638889 CACNA1GO43497 2377 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 SPATA31E1Q6ZUB1 1445 aa0.97□□□□□ -2.25
CCDC7-211ENST00000638889 A0A0A6YYD5 115 aa0.96□□□□□ -2.26
CCDC7-211ENST00000638889 HEATR9A2RTY3 570 aa0.96□□□□□ -2.26
CCDC7-211ENST00000638889 SMCO3A2RU48 225 aa0.96□□□□□ -2.26
CCDC7-211ENST00000638889 IZUMO1RA6ND01 250 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms