RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 TPSD1Q9BZJ3 242 aa11.96□□□□□ -0.5
UBE3A-228ENST00000638155 TMEM140Q9NV12 185 aa11.96□□□□□ -0.5
UBE3A-228ENST00000638155 ANXA10Q9UJ72 324 aa11.96□□□□□ -0.5
UBE3A-228ENST00000638155 ZFP30Q9Y2G7 519 aa11.96□□□□□ -0.5
UBE3A-228ENST00000638155 LOC107986453A0A1B0GWG9 222 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 GAMTQ14353 236 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 HNRNPA1L2Q32P51 320 aaKnown RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 SMUG1Q53HV7 270 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 MANBALQ9NQG1 85 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 Q9Y3F1 56 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 ZNF324O75467 553 aaPredicted RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 SCRG1O75711 98 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 GUSBP08236 651 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 CYBAP13498 195 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 NTNG1Q9Y2I2 539 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 OR51B4Q9Y5P0 310 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 ARNTLO00327 626 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 PVRP15151 417 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TAZQ16635 292 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 LAIR1Q6GTX8 287 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 STARD4Q96DR4 205 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TRMT61AQ96FX7 289 aaKnown RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 CDRT15L2A8MXV6 281 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 CA2P00918 260 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 GLI4P10075 376 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TBXA2RP21731 343 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 GP2P55259 537 aaKnown RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 FOXA1P55317 472 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 RELBQ01201 579 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 GPR137Q96N19 417 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 ICAM5Q9UMF0 924 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TRGV10A0A0A0MS01 117 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 GABRA6Q16445 453 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 APCDD1Q8J025 514 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TEAD3Q99594 435 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 OR2A25A4D2G3 310 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TCTN1Q2MV58 587 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 SORT1Q99523 831 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 FKBP2P26885 142 aaKnown RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 TMEM65Q6PI78 240 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 H1FNTQ75WM6 255 aaPredicted RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 CAMKMTQ7Z624 323 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 CITED2Q99967 270 aaPredicted RBP11.95□□□□□ -0.5
UBE3A-228ENST00000638155 CHST8Q9H2A9 424 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 A4GALTQ9NPC4 353 aa11.95□□□□□ -0.5
UBE3A-228ENST00000638155 PI4KAP42356 2102 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CLDN34H7C241 214 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 FECHP22830 423 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CCL11P51671 97 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 PRTGQ2VWP7 1150 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 FAM26EQ8N5C1 309 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 DCCP43146 1447 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 FITM1A5D6W6 292 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 OR5B21A6NL26 309 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 PRRG2O14669 202 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CTSLP07711 333 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SEMA3BQ13214 749 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 TMEM255BQ8WV15 326 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 INHBCP55103 352 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CTU2Q2VPK5 515 aaKnown RBP11.94□□□□□ -0.5
UBE3A-228ENST00000638155 MAML2Q8IZL2 1156 aaPredicted RBP11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SIT1Q9Y3P8 196 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 HRASP01112 189 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 KRASP01116 189 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CSN3P07498 182 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 LKAAEAR1Q8TD35 194 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 ATP23Q9Y6H3 246 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 RIGQ13278 110 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 OR5AU1Q8NGC0 362 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 AHCTF1Q8WYP5 2266 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 C5orf49A4QMS7 147 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 GAGE10A6NGK3 116 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SEMG1P04279 462 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 OR10J1P30954 320 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 HTR6P50406 440 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 APOOQ9BUR5 198 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CNTD2Q9H8S5 307 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
UBE3A-228ENST00000638155 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SYNGR2O43760 224 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 TMEM127O75204 238 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 FGF2P09038 288 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 CST9Q5W186 159 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 GDF7Q7Z4P5 450 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SFTPA2Q8IWL1 248 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 SFTPA1Q8IWL2 248 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 MCHR2Q969V1 340 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 IGSF21Q96ID5 467 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 DOK5Q9P104 306 aa11.94□□□□□ -0.5
UBE3A-228ENST00000638155 ACP1P24666 158 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms