RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TP53I3Q53FA7 332 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 WDR38Q5JTN6 314 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 SYT6Q5T7P8 510 aaPredicted RBP5.77□□□□□ -1.49
UPF3B-205ENST00000636792 DMKNQ6E0U4 476 aaPredicted RBP5.77□□□□□ -1.49
UPF3B-205ENST00000636792 PAMR1Q6UXH9 720 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 PGAP1Q75T13 922 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 ZNF101Q8IZC7 436 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 SPARTQ8N0X7 666 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 FBXL14Q8N1E6 418 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 SPERTQ8NA61 448 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 OR8B12Q8NGG6 310 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 OR5AK2Q8NH90 309 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 ABHD4Q8TB40 342 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 SYNPRQ8TBG9 265 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 TMEM171Q8WVE6 324 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 UFD1Q92890 307 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 HAVCR1Q96D42 359 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 CPNE2Q96FN4 548 aaPredicted RBP5.77□□□□□ -1.49
UPF3B-205ENST00000636792 MARS2Q96GW9 593 aaKnown RBP5.77□□□□□ -1.49
UPF3B-205ENST00000636792 MGLLQ99685 303 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 RHNO1Q9BSD3 238 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 PBOV1Q9GZY1 135 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 G6PC2Q9NQR9 355 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 NKIRAS2Q9NYR9 191 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 MRPL15Q9P015 296 aaKnown RBP5.77□□□□□ -1.49
UPF3B-205ENST00000636792 ERVK-18Q9QC07 812 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 ST6GALNAC2Q9UJ37 374 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 HHLA2Q9UM44 414 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 SLC22A13Q9Y226 551 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 GRIP1Q9Y3R0 1128 aa5.77□□□□□ -1.49
UPF3B-205ENST00000636792 TANC2Q9HCD6 1990 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 TRBV2A0A0J9YWF9 115 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ZNF816-ZNF321PA0A0X1KG74 233 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 A0A1B0GVI7 797 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 A1L4Q6 167 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 OR4C45A6NMZ5 311 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 H7C417 338 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CCRL2O00421 344 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 GMDSO60547 372 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 GATBO75879 557 aaKnown RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 PNPP00491 289 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 LCKP06239 509 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ERCC1P07992 297 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CPEP16870 476 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 HCCSP53701 268 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CDH15P55291 814 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 SNRPD2P62316 118 aaKnown RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 MFGE8Q08431 387 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 DBPQ10586 325 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 GK2Q14410 553 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 MED22Q15528 200 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ADIPOQQ15848 244 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 SNAI3Q3KNW1 292 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 OR2G6Q5TZ20 316 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 AGAP6Q5VW22 663 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 FAM57BQ71RH2 274 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 PAQR4Q8N4S7 273 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CELF2-AS1Q8N7Q2 184 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ZNF676Q8N7Q3 588 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 KBTBD8Q8NFY9 601 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 KLF14Q8TD94 323 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 GPR148Q8TDV2 347 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 NINJ1Q92982 152 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 PIGTQ969N2 578 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 REEP6Q96HR9 211 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 PGLYRP3Q96LB9 341 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 C1QTNF6Q9BXI9 259 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CLEC4MQ9H2X3 399 aaPredicted RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 MS4A5Q9H3V2 200 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ISG20L2Q9H9L3 353 aaKnown RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 PLEKHA1Q9HB21 404 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CBLN4Q9NTU7 201 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 NDUFB11Q9NX14 153 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CISD1Q9NZ45 108 aaKnown RBP5.76□□□□□ -1.49
UPF3B-205ENST00000636792 CLEC2DQ9UHP7 191 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ZDHHC8Q9ULC8 765 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 MPC1Q9Y5U8 109 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ATP23Q9Y6H3 246 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 V9GYS6 101 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 RTTNQ86VV8 2226 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ARFGEF3Q5TH69 2177 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 ABCA4P78363 2273 aa5.76□□□□□ -1.49
UPF3B-205ENST00000636792 DSCAMO60469 2012 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 USP9YO00507 2555 aaPredicted RBP5.75□□□□□ -1.49
UPF3B-205ENST00000636792 FASNP49327 2511 aaKnown RBP5.75□□□□□ -1.49
UPF3B-205ENST00000636792 FLNCQ14315 2725 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 LOC107986453A0A1B0GWG9 222 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 PLSCR5A0PG75 271 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 IFNL4K9M1U5 179 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 M0R233 179 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 PSMD9O00233 223 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 TBX1O43435 398 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 SYT7O43581 403 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 TMEM127O75204 238 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 SC5DO75845 299 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 ARL6IP5O75915 188 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 RPP14O95059 124 aaKnown RBP5.75□□□□□ -1.49
UPF3B-205ENST00000636792 ZFPL1O95159 310 aa5.75□□□□□ -1.49
UPF3B-205ENST00000636792 CLPTM1O96005 669 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms