RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 H0YIZ8 118 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 MFNGO00587 321 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 DUX1O43812 170 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 ACTL6AO96019 429 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 FBXW4P57775 412 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 DCDP81605 110 aaKnown RBP12.87□□□□□ -0.35
CLN6-215ENST00000636674 GLIPR1L1Q6UWM5 242 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 RTN4RL2Q86UN3 420 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 LINC00518Q8N0U6 118 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 OR2I1PQ8NGU4 316 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 OR51E1Q8TCB6 317 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 RELTQ969Z4 430 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 RRNAD1Q96FB5 475 aaKnown RBP12.87□□□□□ -0.35
CLN6-215ENST00000636674 MRGPRX4Q96LA9 322 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
CLN6-215ENST00000636674 FLVCR1Q9Y5Y0 555 aa12.87□□□□□ -0.35
CLN6-215ENST00000636674 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 GPR31O00270 319 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 ZNF354AO60765 605 aaPredicted RBP12.86□□□□□ -0.35
CLN6-215ENST00000636674 PGA4P0DJD7 388 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 PGA3P0DJD8 388 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 BCKDHBP21953 392 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 OR1D5P58170 312 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 AIMP2Q13155 320 aaKnown RBP12.86□□□□□ -0.35
CLN6-215ENST00000636674 SGCAQ16586 387 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 DHRS7BQ6IAN0 325 aaPredicted RBP12.86□□□□□ -0.35
CLN6-215ENST00000636674 LDLRAD3Q86YD5 345 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 NFAM1Q8NET5 270 aaPredicted RBP12.86□□□□□ -0.35
CLN6-215ENST00000636674 TSTD1Q8NFU3 115 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 ZNF501Q96CX3 271 aaPredicted RBP12.86□□□□□ -0.35
CLN6-215ENST00000636674 EMC6Q9BV81 110 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 TMEM59Q9BXS4 323 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 IGLV3-12A0A075B6K2 115 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 IGLV3-32A0A0A0MS00 114 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 SOCS1O15524 211 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 MPIG6BO95866 241 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 FAM157CP0CG43 387 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 MSX1P28360 303 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 TMEM50BP56557 158 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 KCNMB1Q16558 191 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 OR8B12Q8NGG6 310 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 RHBDD1Q8TEB9 315 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 VDAC3Q9Y277 283 aa12.86□□□□□ -0.35
CLN6-215ENST00000636674 IGHG1P01857 330 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 OR3A4PP47883 348 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 P2RY4P51582 365 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 NXPH1P58417 271 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 SUPT4H1P63272 117 aaKnown RBP12.85□□□□□ -0.35
CLN6-215ENST00000636674 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 SLC25A47Q6Q0C1 308 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 TMPPEQ6ZT21 453 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 UEVLDQ8IX04 471 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 OR2AJ1Q8NGZ0 328 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 PAQR8Q8TEZ7 354 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 TMEM41AQ96HV5 264 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 URM1Q9BTM9 101 aaKnown RBP12.85□□□□□ -0.35
CLN6-215ENST00000636674 TPSD1Q9BZJ3 242 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
CLN6-215ENST00000636674 PNRC2Q9NPJ4 139 aaKnown RBP12.85□□□□□ -0.35
CLN6-215ENST00000636674 SLC22A11Q9NSA0 550 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 OSGIN2Q9Y236 505 aa12.85□□□□□ -0.35
CLN6-215ENST00000636674 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 FOXI3A8MTJ6 420 aaPredicted RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 H7C2Y5 167 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 EFNA2O43921 213 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 RAD51DO75771 328 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 PET100P0DJ07 73 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 GIMD1P0DJR0 217 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 ABOP16442 354 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 ZNF17P17021 662 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 CLRN1P58418 232 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 MYBPHQ13203 477 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 IL15RAQ13261 267 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 MST1LQ2TV78 715 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 PLPPR5Q32ZL2 321 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 C16orf47Q6ZP98 133 aaPredicted RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 DOK3Q7L591 496 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 RNF144BQ7Z419 303 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 ABHD12BQ7Z5M8 362 aaPredicted RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 OR4A4PQ8NGN8 299 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 OR5H2Q8NGV7 314 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 ADAMTS17Q8TE56 1095 aa12.84□□□□□ -0.35
CLN6-215ENST00000636674 SAT2Q96F10 170 aaPredicted RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
CLN6-215ENST00000636674 SEC11CQ9BY50 192 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms