RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZP4Q12836 540 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 HLA-DQA1Q5Y7H0 255 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 GLIPR1L1Q6UWM5 242 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 SFTPA2Q8IWL1 248 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 OR10H5Q8NGA6 315 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 OR9K2Q8NGE7 335 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 ASB10Q8WXI3 467 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
CACNA1A-220ENST00000635988 C7orf77A4D0Y5 90 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 IGHV2-5P01817 119 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 P2RY4P51582 365 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 STARD6P59095 220 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 AWAT1Q58HT5 328 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 SECTM1Q8WVN6 248 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 SLAMF6Q96DU3 332 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 MALSU1Q96EH3 234 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 MOB1AQ9H8S9 216 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 C1orf123Q9NWV4 160 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 PPP4R1LQ9P1A2 415 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 TINAGQ9UJW2 476 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 OSGIN2Q9Y236 505 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 B3GALT5Q9Y2C3 310 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 HS3ST3A1Q9Y663 406 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 A0A0A6YYD4 124 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 TSPAN2O60636 221 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 CDC14BO60729 498 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 IGKV3-11P04433 115 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 SFTPBP07988 381 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 OR8U9P0C7N5 309 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 RAB5AP20339 215 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 ECI1P42126 302 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 FOXK1P85037 733 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 ARFRP1Q13795 201 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 SPRED2Q7Z698 418 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 METTL27Q8N6F8 245 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 OR13G1Q8NGZ3 307 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 OR8U1Q8NH10 309 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 ZNF285Q96NJ3 590 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
CACNA1A-220ENST00000635988 SOCS1O15524 211 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 HOXB5P09067 269 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 RPS2P15880 293 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 ZNF708P17019 499 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 PI3P19957 117 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 EIF2S3P41091 472 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 UBAC2Q8NBM4 344 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 PRR13Q9NZ81 148 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 GHRLQ9UBU3 117 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 C14orf166Q9Y224 244 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 CACNA1IQ9P0X4 2223 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 PRAMEF26H0Y7S4 382 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 TO15178 435 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 IFNA2P01563 188 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 SNRNP70P08621 437 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 HLA-DOBP13765 273 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 FCGR2CP31995 323 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 FMODQ06828 376 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 RHEBQ15382 184 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 AADACL3Q5VUY0 350 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 ETV3LQ6ZN32 361 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 PLEKHA2Q9HB19 425 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 FBXL17Q9UF56 701 aa13.12□□□□□ -0.31
CACNA1A-220ENST00000635988 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 AP4M1O00189 453 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 WRBO00258 174 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 ACKR3P25106 362 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 SNCAP37840 140 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 UCP2P55851 309 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM50BP56557 158 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 PLCXD2Q0VAA5 305 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 IAH1Q2TAA2 248 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 KRBOX4Q5JUW0 171 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM104Q8NE00 496 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 OR13H1Q8NG92 308 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 ZNF721Q8TF20 911 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM234Q8WY98 164 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 OR11A1Q9GZK7 315 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 TMPRSS5Q9H3S3 457 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 LANCL2Q9NS86 450 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 SUSD2Q9UGT4 822 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 TMEM184BQ9Y519 407 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 FREM3P0C091 2139 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 MS4A18H0YCH9 400 aa13.11□□□□□ -0.31
CACNA1A-220ENST00000635988 M0R036 132 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms