RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 CSNK2A3Q8NEV1 391 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 OR8J1Q8NGP2 316 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PATZ1Q9HBE1 687 aaKnown RBP13.2□□□□□ -0.3
LINC00339-207ENST00000634712 IMPAD1Q9NX62 359 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF391Q9UJN7 358 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PPIAL4AQ9Y536 164 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 A0A0G2JMP0 313 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 A0A0X1KG70 313 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 hCG_38984A0A1B0GV85 526 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 TMEM269A0A1B0GVZ9 245 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ACOD1A6NK06 481 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF670-ZNF695F2Z2N8 137 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 EI24O14681 340 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 PNPP00491 289 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 GRPP07492 148 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ATP6V1E1P36543 226 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ALDH3A2P51648 485 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 LCN2P80188 198 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 DCAF12L2Q5VW00 463 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 TEX29Q8N6K0 151 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 OR4M2Q8NGB6 313 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 DVL3Q92997 716 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-207ENST00000634712 TTTY10Q9BZA0 68 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 HAO2Q9NYQ3 351 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF319Q9P2F9 582 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 RNF7Q9UBF6 113 aa13.2□□□□□ -0.3
LINC00339-207ENST00000634712 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
LINC00339-207ENST00000634712 A6NLC8 198 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 FAM20BO75063 409 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ALPLP05186 524 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 DCTDP32321 178 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 PMELP40967 661 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 CXCR4P61073 352 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ROM1Q03395 351 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 POU4F2Q12837 409 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 MPPED2Q15777 294 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF829Q3KNS6 432 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ZIK1Q3SY52 487 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ESCO2Q56NI9 601 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-207ENST00000634712 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 CBR4Q8N4T8 237 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 OR8B12Q8NGG6 310 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 OR51G2Q8NGK0 314 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 FAM81AQ8TBF8 368 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 Q8TCH9 128 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 TRUB1Q8WWH5 349 aaKnown RBP13.19□□□□□ -0.3
LINC00339-207ENST00000634712 STMN2Q93045 179 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 RFKQ969G6 155 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 OR8B4Q96RC9 309 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 C9orf16Q9BUW7 83 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 PAPOLGQ9BWT3 736 aaKnown RBP13.19□□□□□ -0.3
LINC00339-207ENST00000634712 ADGRL4Q9HBW9 690 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 CLN6Q9NWW5 311 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 MIOXQ9UGB7 285 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
LINC00339-207ENST00000634712 hCG_1807616A0A1W2PRN6 198 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 ANXA2P2A6NMY6 339 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 BAG2O95816 211 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 RPS2P15880 293 aaKnown RBP13.18□□□□□ -0.3
LINC00339-207ENST00000634712 GATA3P23771 443 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 CPT2P23786 658 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 HTR1FP30939 366 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 BOLLQ8N9W6 283 aaKnown RBP13.18□□□□□ -0.3
LINC00339-207ENST00000634712 HIST1H2AAQ96QV6 131 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 MICU1Q9BPX6 476 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 C1orf123Q9NWV4 160 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-207ENST00000634712 GTF2A1LQ9UNN4 478 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 RHBDD3Q9Y3P4 386 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 SVEP1Q4LDE5 3571 aa13.18□□□□□ -0.3
LINC00339-207ENST00000634712 CEACAM18A8MTB9 384 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 J3QLI3 93 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 THBS2P35442 1172 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 MAP2K3P46734 347 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 IL5RAQ01344 420 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 SCGB2A2Q13296 93 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 TMED1Q13445 227 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 FAM201AQ5SY85 155 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 ZBTB49Q6ZSB9 765 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 NLRC3Q7RTR2 1065 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 PIGCQ92535 297 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 TBX5Q99593 518 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 APOL4Q9BPW4 351 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 TMEM246Q9BRR3 403 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 ABCB9Q9NP78 766 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 G6PC2Q9NQR9 355 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 FAM206AQ9NX38 181 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 METRNQ9UJH8 293 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 MPC1Q9Y5U8 109 aa13.17□□□□□ -0.3
LINC00339-207ENST00000634712 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 FSTL3O95633 263 aa13.16□□□□□ -0.3
LINC00339-207ENST00000634712 PTBP3O95758 552 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms